Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 AC008175.2-201ENST00000612840 297 ntBASIC19.03■□□□□ 0.64
POLR2J3Q9H1A7 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
POLR2J3Q9H1A7 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
POLR2J3Q9H1A7 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
POLR2J3Q9H1A7 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
POLR2J3Q9H1A7 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
POLR2J3Q9H1A7 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
POLR2J3Q9H1A7 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
POLR2J3Q9H1A7 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
POLR2J3Q9H1A7 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
POLR2J3Q9H1A7 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
POLR2J3Q9H1A7 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
POLR2J3Q9H1A7 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.02■□□□□ 0.64
POLR2J3Q9H1A7 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
POLR2J3Q9H1A7 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.02■□□□□ 0.64
POLR2J3Q9H1A7 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.02■□□□□ 0.64
POLR2J3Q9H1A7 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.02■□□□□ 0.64
POLR2J3Q9H1A7 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.02■□□□□ 0.64
POLR2J3Q9H1A7 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
POLR2J3Q9H1A7 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
POLR2J3Q9H1A7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
POLR2J3Q9H1A7 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
POLR2J3Q9H1A7 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.02■□□□□ 0.63
POLR2J3Q9H1A7 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
POLR2J3Q9H1A7 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
POLR2J3Q9H1A7 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
POLR2J3Q9H1A7 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
POLR2J3Q9H1A7 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
POLR2J3Q9H1A7 AL391422.3-201ENST00000603791 2761 ntBASIC19.01■□□□□ 0.63
POLR2J3Q9H1A7 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
POLR2J3Q9H1A7 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.01■□□□□ 0.63
POLR2J3Q9H1A7 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
POLR2J3Q9H1A7 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
POLR2J3Q9H1A7 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.01■□□□□ 0.63
POLR2J3Q9H1A7 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
POLR2J3Q9H1A7 AC007225.1-201ENST00000566331 1836 ntBASIC19.01■□□□□ 0.63
POLR2J3Q9H1A7 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
POLR2J3Q9H1A7 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
POLR2J3Q9H1A7 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
POLR2J3Q9H1A7 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
POLR2J3Q9H1A7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
POLR2J3Q9H1A7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
POLR2J3Q9H1A7 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.01■□□□□ 0.63
POLR2J3Q9H1A7 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
POLR2J3Q9H1A7 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
POLR2J3Q9H1A7 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
POLR2J3Q9H1A7 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.01■□□□□ 0.63
POLR2J3Q9H1A7 AC027702.1-201ENST00000563810 1770 ntBASIC19.01■□□□□ 0.63
POLR2J3Q9H1A7 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
POLR2J3Q9H1A7 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
POLR2J3Q9H1A7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.01■□□□□ 0.63
POLR2J3Q9H1A7 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
POLR2J3Q9H1A7 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
POLR2J3Q9H1A7 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
POLR2J3Q9H1A7 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19■□□□□ 0.63
POLR2J3Q9H1A7 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
POLR2J3Q9H1A7 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
POLR2J3Q9H1A7 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
POLR2J3Q9H1A7 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
POLR2J3Q9H1A7 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
POLR2J3Q9H1A7 NT5C3AP1-201ENST00000394500 1012 ntBASIC19■□□□□ 0.63
POLR2J3Q9H1A7 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19■□□□□ 0.63
POLR2J3Q9H1A7 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
POLR2J3Q9H1A7 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
POLR2J3Q9H1A7 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19■□□□□ 0.63
POLR2J3Q9H1A7 AC011484.1-201ENST00000377652 1995 ntBASIC19■□□□□ 0.63
POLR2J3Q9H1A7 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
POLR2J3Q9H1A7 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19■□□□□ 0.63
POLR2J3Q9H1A7 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
POLR2J3Q9H1A7 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
POLR2J3Q9H1A7 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19■□□□□ 0.63
POLR2J3Q9H1A7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19■□□□□ 0.63
POLR2J3Q9H1A7 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19■□□□□ 0.63
POLR2J3Q9H1A7 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19■□□□□ 0.63
POLR2J3Q9H1A7 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
POLR2J3Q9H1A7 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
POLR2J3Q9H1A7 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
POLR2J3Q9H1A7 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
POLR2J3Q9H1A7 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
POLR2J3Q9H1A7 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
POLR2J3Q9H1A7 KRT87P-202ENST00000534226 1464 ntBASIC18.99■□□□□ 0.63
POLR2J3Q9H1A7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
POLR2J3Q9H1A7 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.99■□□□□ 0.63
POLR2J3Q9H1A7 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.99■□□□□ 0.63
POLR2J3Q9H1A7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
POLR2J3Q9H1A7 AL139246.5-201ENST00000606645 996 ntBASIC18.99■□□□□ 0.63
POLR2J3Q9H1A7 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
POLR2J3Q9H1A7 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
POLR2J3Q9H1A7 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.99■□□□□ 0.63
POLR2J3Q9H1A7 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
POLR2J3Q9H1A7 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
POLR2J3Q9H1A7 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
POLR2J3Q9H1A7 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
POLR2J3Q9H1A7 AC020907.5-201ENST00000624372 1936 ntBASIC18.98■□□□□ 0.63
POLR2J3Q9H1A7 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
POLR2J3Q9H1A7 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
POLR2J3Q9H1A7 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
POLR2J3Q9H1A7 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
POLR2J3Q9H1A7 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.98■□□□□ 0.63
POLR2J3Q9H1A7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms