Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.17■□□□□ 0.5
COMMD4Q9H0A8 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COMMD4Q9H0A8 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.17■□□□□ 0.5
COMMD4Q9H0A8 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.17■□□□□ 0.5
COMMD4Q9H0A8 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.17■□□□□ 0.5
COMMD4Q9H0A8 FP700111.2-201ENST00000619190 1892 ntBASIC18.17■□□□□ 0.5
COMMD4Q9H0A8 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COMMD4Q9H0A8 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
COMMD4Q9H0A8 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.17■□□□□ 0.5
COMMD4Q9H0A8 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.17■□□□□ 0.5
COMMD4Q9H0A8 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COMMD4Q9H0A8 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.17■□□□□ 0.5
COMMD4Q9H0A8 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COMMD4Q9H0A8 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
COMMD4Q9H0A8 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COMMD4Q9H0A8 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.16■□□□□ 0.5
COMMD4Q9H0A8 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.16■□□□□ 0.5
COMMD4Q9H0A8 AC005224.4-201ENST00000583262 1652 ntBASIC18.16■□□□□ 0.5
COMMD4Q9H0A8 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.16■□□□□ 0.5
COMMD4Q9H0A8 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
COMMD4Q9H0A8 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COMMD4Q9H0A8 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.16■□□□□ 0.5
COMMD4Q9H0A8 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COMMD4Q9H0A8 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
COMMD4Q9H0A8 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COMMD4Q9H0A8 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
COMMD4Q9H0A8 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COMMD4Q9H0A8 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COMMD4Q9H0A8 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
COMMD4Q9H0A8 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
COMMD4Q9H0A8 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
COMMD4Q9H0A8 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COMMD4Q9H0A8 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COMMD4Q9H0A8 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COMMD4Q9H0A8 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.15■□□□□ 0.5
COMMD4Q9H0A8 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COMMD4Q9H0A8 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
COMMD4Q9H0A8 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COMMD4Q9H0A8 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COMMD4Q9H0A8 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COMMD4Q9H0A8 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COMMD4Q9H0A8 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COMMD4Q9H0A8 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.15■□□□□ 0.5
COMMD4Q9H0A8 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COMMD4Q9H0A8 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
COMMD4Q9H0A8 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
COMMD4Q9H0A8 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COMMD4Q9H0A8 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COMMD4Q9H0A8 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COMMD4Q9H0A8 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.15■□□□□ 0.5
COMMD4Q9H0A8 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
COMMD4Q9H0A8 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COMMD4Q9H0A8 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.14■□□□□ 0.5
COMMD4Q9H0A8 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
COMMD4Q9H0A8 AL391422.3-201ENST00000603791 2761 ntBASIC18.14■□□□□ 0.5
COMMD4Q9H0A8 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COMMD4Q9H0A8 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COMMD4Q9H0A8 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
COMMD4Q9H0A8 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COMMD4Q9H0A8 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COMMD4Q9H0A8 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COMMD4Q9H0A8 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COMMD4Q9H0A8 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.14■□□□□ 0.49
COMMD4Q9H0A8 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COMMD4Q9H0A8 AC105233.4-201ENST00000642045 216 ntBASIC18.14■□□□□ 0.49
COMMD4Q9H0A8 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
COMMD4Q9H0A8 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
COMMD4Q9H0A8 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COMMD4Q9H0A8 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.14■□□□□ 0.49
COMMD4Q9H0A8 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
COMMD4Q9H0A8 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.14■□□□□ 0.49
COMMD4Q9H0A8 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
COMMD4Q9H0A8 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
COMMD4Q9H0A8 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
COMMD4Q9H0A8 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COMMD4Q9H0A8 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COMMD4Q9H0A8 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COMMD4Q9H0A8 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
COMMD4Q9H0A8 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
COMMD4Q9H0A8 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
COMMD4Q9H0A8 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
COMMD4Q9H0A8 UNC93B3-201ENST00000308076 687 ntBASIC18.13■□□□□ 0.49
COMMD4Q9H0A8 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
COMMD4Q9H0A8 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
COMMD4Q9H0A8 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
COMMD4Q9H0A8 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COMMD4Q9H0A8 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
COMMD4Q9H0A8 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COMMD4Q9H0A8 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COMMD4Q9H0A8 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
COMMD4Q9H0A8 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COMMD4Q9H0A8 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COMMD4Q9H0A8 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COMMD4Q9H0A8 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COMMD4Q9H0A8 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COMMD4Q9H0A8 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
COMMD4Q9H0A8 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COMMD4Q9H0A8 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COMMD4Q9H0A8 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COMMD4Q9H0A8 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms