Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
HDHD3Q9BSH5 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HDHD3Q9BSH5 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.4■□□□□ 0.38
HDHD3Q9BSH5 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.39■□□□□ 0.38
HDHD3Q9BSH5 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
HDHD3Q9BSH5 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
HDHD3Q9BSH5 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.39■□□□□ 0.37
HDHD3Q9BSH5 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HDHD3Q9BSH5 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HDHD3Q9BSH5 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
HDHD3Q9BSH5 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC17.39■□□□□ 0.37
HDHD3Q9BSH5 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.39■□□□□ 0.37
HDHD3Q9BSH5 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.39■□□□□ 0.37
HDHD3Q9BSH5 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
HDHD3Q9BSH5 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.39■□□□□ 0.37
HDHD3Q9BSH5 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HDHD3Q9BSH5 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.39■□□□□ 0.37
HDHD3Q9BSH5 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.39■□□□□ 0.37
HDHD3Q9BSH5 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HDHD3Q9BSH5 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HDHD3Q9BSH5 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.38■□□□□ 0.37
HDHD3Q9BSH5 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.38■□□□□ 0.37
HDHD3Q9BSH5 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
HDHD3Q9BSH5 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HDHD3Q9BSH5 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HDHD3Q9BSH5 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HDHD3Q9BSH5 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
HDHD3Q9BSH5 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HDHD3Q9BSH5 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.38■□□□□ 0.37
HDHD3Q9BSH5 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HDHD3Q9BSH5 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HDHD3Q9BSH5 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
HDHD3Q9BSH5 MIR572-201ENST00000384983 95 ntBASIC17.38■□□□□ 0.37
HDHD3Q9BSH5 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HDHD3Q9BSH5 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.38■□□□□ 0.37
HDHD3Q9BSH5 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.38■□□□□ 0.37
HDHD3Q9BSH5 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HDHD3Q9BSH5 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HDHD3Q9BSH5 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HDHD3Q9BSH5 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HDHD3Q9BSH5 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HDHD3Q9BSH5 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HDHD3Q9BSH5 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.37■□□□□ 0.37
HDHD3Q9BSH5 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
HDHD3Q9BSH5 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HDHD3Q9BSH5 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.37■□□□□ 0.37
HDHD3Q9BSH5 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HDHD3Q9BSH5 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.37■□□□□ 0.37
HDHD3Q9BSH5 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
HDHD3Q9BSH5 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HDHD3Q9BSH5 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.37■□□□□ 0.37
HDHD3Q9BSH5 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.37■□□□□ 0.37
HDHD3Q9BSH5 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.37■□□□□ 0.37
HDHD3Q9BSH5 EEF1DP3-203ENST00000566025 782 ntBASIC17.37■□□□□ 0.37
HDHD3Q9BSH5 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.37■□□□□ 0.37
HDHD3Q9BSH5 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HDHD3Q9BSH5 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
HDHD3Q9BSH5 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
HDHD3Q9BSH5 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HDHD3Q9BSH5 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HDHD3Q9BSH5 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HDHD3Q9BSH5 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HDHD3Q9BSH5 AC007952.6-201ENST00000573168 2673 ntBASIC17.36■□□□□ 0.37
HDHD3Q9BSH5 AC003957.1-201ENST00000625108 2673 ntBASIC17.36■□□□□ 0.37
HDHD3Q9BSH5 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
HDHD3Q9BSH5 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HDHD3Q9BSH5 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HDHD3Q9BSH5 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
HDHD3Q9BSH5 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
HDHD3Q9BSH5 AL162377.1-201ENST00000618844 1793 ntBASIC17.36■□□□□ 0.37
HDHD3Q9BSH5 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.36■□□□□ 0.37
HDHD3Q9BSH5 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
HDHD3Q9BSH5 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.36■□□□□ 0.37
HDHD3Q9BSH5 AF213884.3-201ENST00000563833 479 ntBASIC17.36■□□□□ 0.37
HDHD3Q9BSH5 AC106739.1-201ENST00000617035 715 ntBASIC17.36■□□□□ 0.37
HDHD3Q9BSH5 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.36■□□□□ 0.37
HDHD3Q9BSH5 AC011484.1-201ENST00000377652 1995 ntBASIC17.36■□□□□ 0.37
HDHD3Q9BSH5 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.36■□□□□ 0.37
HDHD3Q9BSH5 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
HDHD3Q9BSH5 AC008406.3-201ENST00000620001 1374 ntBASIC17.36■□□□□ 0.37
HDHD3Q9BSH5 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HDHD3Q9BSH5 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
HDHD3Q9BSH5 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
HDHD3Q9BSH5 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.36■□□□□ 0.37
HDHD3Q9BSH5 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.36■□□□□ 0.37
HDHD3Q9BSH5 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
HDHD3Q9BSH5 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HDHD3Q9BSH5 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
HDHD3Q9BSH5 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.36■□□□□ 0.37
HDHD3Q9BSH5 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.36■□□□□ 0.37
HDHD3Q9BSH5 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HDHD3Q9BSH5 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.35■□□□□ 0.37
HDHD3Q9BSH5 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
HDHD3Q9BSH5 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.35■□□□□ 0.37
HDHD3Q9BSH5 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.35■□□□□ 0.37
HDHD3Q9BSH5 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.35■□□□□ 0.37
HDHD3Q9BSH5 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.35■□□□□ 0.37
HDHD3Q9BSH5 AC053503.5-201ENST00000601508 636 ntBASIC17.35■□□□□ 0.37
HDHD3Q9BSH5 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.35■□□□□ 0.37
HDHD3Q9BSH5 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms