Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.4■□□□□ 0.7
TUBA1CQ9BQE3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.4■□□□□ 0.7
TUBA1CQ9BQE3 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.4■□□□□ 0.7
TUBA1CQ9BQE3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TUBA1CQ9BQE3 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
TUBA1CQ9BQE3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TUBA1CQ9BQE3 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.4■□□□□ 0.7
TUBA1CQ9BQE3 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.4■□□□□ 0.7
TUBA1CQ9BQE3 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.4■□□□□ 0.7
TUBA1CQ9BQE3 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.4■□□□□ 0.7
TUBA1CQ9BQE3 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TUBA1CQ9BQE3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TUBA1CQ9BQE3 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TUBA1CQ9BQE3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TUBA1CQ9BQE3 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TUBA1CQ9BQE3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TUBA1CQ9BQE3 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
TUBA1CQ9BQE3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.39■□□□□ 0.7
TUBA1CQ9BQE3 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TUBA1CQ9BQE3 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TUBA1CQ9BQE3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
TUBA1CQ9BQE3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
TUBA1CQ9BQE3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.7
TUBA1CQ9BQE3 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TUBA1CQ9BQE3 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.39■□□□□ 0.69
TUBA1CQ9BQE3 AC079089.2-201ENST00000531211 1277 ntBASIC19.39■□□□□ 0.69
TUBA1CQ9BQE3 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.39■□□□□ 0.69
TUBA1CQ9BQE3 IKBKGP1-201ENST00000612193 1073 ntBASIC19.39■□□□□ 0.69
TUBA1CQ9BQE3 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TUBA1CQ9BQE3 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.39■□□□□ 0.69
TUBA1CQ9BQE3 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.39■□□□□ 0.69
TUBA1CQ9BQE3 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.39■□□□□ 0.69
TUBA1CQ9BQE3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TUBA1CQ9BQE3 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TUBA1CQ9BQE3 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TUBA1CQ9BQE3 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TUBA1CQ9BQE3 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.39■□□□□ 0.69
TUBA1CQ9BQE3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TUBA1CQ9BQE3 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TUBA1CQ9BQE3 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TUBA1CQ9BQE3 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TUBA1CQ9BQE3 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TUBA1CQ9BQE3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.38■□□□□ 0.69
TUBA1CQ9BQE3 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.38■□□□□ 0.69
TUBA1CQ9BQE3 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.38■□□□□ 0.69
TUBA1CQ9BQE3 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.38■□□□□ 0.69
TUBA1CQ9BQE3 AL049796.1-201ENST00000565336 1766 ntBASIC19.38■□□□□ 0.69
TUBA1CQ9BQE3 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TUBA1CQ9BQE3 BX323043.1-201ENST00000641006 1765 ntBASIC19.38■□□□□ 0.69
TUBA1CQ9BQE3 AC087289.5-201ENST00000586076 3175 ntBASIC19.38■□□□□ 0.69
TUBA1CQ9BQE3 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TUBA1CQ9BQE3 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TUBA1CQ9BQE3 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.37■□□□□ 0.69
TUBA1CQ9BQE3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TUBA1CQ9BQE3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TUBA1CQ9BQE3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.37■□□□□ 0.69
TUBA1CQ9BQE3 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.37■□□□□ 0.69
TUBA1CQ9BQE3 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.37■□□□□ 0.69
TUBA1CQ9BQE3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
TUBA1CQ9BQE3 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TUBA1CQ9BQE3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TUBA1CQ9BQE3 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TUBA1CQ9BQE3 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TUBA1CQ9BQE3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.37■□□□□ 0.69
TUBA1CQ9BQE3 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.37■□□□□ 0.69
TUBA1CQ9BQE3 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.37■□□□□ 0.69
TUBA1CQ9BQE3 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TUBA1CQ9BQE3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
TUBA1CQ9BQE3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TUBA1CQ9BQE3 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TUBA1CQ9BQE3 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TUBA1CQ9BQE3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
TUBA1CQ9BQE3 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TUBA1CQ9BQE3 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.36■□□□□ 0.69
TUBA1CQ9BQE3 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
TUBA1CQ9BQE3 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TUBA1CQ9BQE3 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.36■□□□□ 0.69
TUBA1CQ9BQE3 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.36■□□□□ 0.69
TUBA1CQ9BQE3 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TUBA1CQ9BQE3 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TUBA1CQ9BQE3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.36■□□□□ 0.69
TUBA1CQ9BQE3 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TUBA1CQ9BQE3 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.36■□□□□ 0.69
TUBA1CQ9BQE3 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.36■□□□□ 0.69
TUBA1CQ9BQE3 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TUBA1CQ9BQE3 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TUBA1CQ9BQE3 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
TUBA1CQ9BQE3 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.36■□□□□ 0.69
TUBA1CQ9BQE3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TUBA1CQ9BQE3 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.35■□□□□ 0.69
TUBA1CQ9BQE3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TUBA1CQ9BQE3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.35■□□□□ 0.69
TUBA1CQ9BQE3 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TUBA1CQ9BQE3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.35■□□□□ 0.69
TUBA1CQ9BQE3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TUBA1CQ9BQE3 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.35■□□□□ 0.69
TUBA1CQ9BQE3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TUBA1CQ9BQE3 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.35■□□□□ 0.69
TUBA1CQ9BQE3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TUBA1CQ9BQE3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms