Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
FOXC2Q99958 ABCB10P4-201ENST00000566803 2184 ntBASIC17.42■□□□□ 0.38
FOXC2Q99958 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXC2Q99958 AC092068.2-201ENST00000590491 1708 ntBASIC17.42■□□□□ 0.38
FOXC2Q99958 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
FOXC2Q99958 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXC2Q99958 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXC2Q99958 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
FOXC2Q99958 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.42■□□□□ 0.38
FOXC2Q99958 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.42■□□□□ 0.38
FOXC2Q99958 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
FOXC2Q99958 AL353708.3-201ENST00000610272 989 ntBASIC17.42■□□□□ 0.38
FOXC2Q99958 PREB-202ENST00000406567 1910 ntTSL 5 BASIC17.42■□□□□ 0.38
FOXC2Q99958 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC17.42■□□□□ 0.38
FOXC2Q99958 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXC2Q99958 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.42■□□□□ 0.38
FOXC2Q99958 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
FOXC2Q99958 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FOXC2Q99958 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.42■□□□□ 0.38
FOXC2Q99958 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
FOXC2Q99958 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
FOXC2Q99958 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
FOXC2Q99958 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
FOXC2Q99958 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FOXC2Q99958 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FOXC2Q99958 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FOXC2Q99958 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
FOXC2Q99958 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FOXC2Q99958 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.41■□□□□ 0.38
FOXC2Q99958 KRASP1-201ENST00000407852 552 ntBASIC17.41■□□□□ 0.38
FOXC2Q99958 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.41■□□□□ 0.38
FOXC2Q99958 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
FOXC2Q99958 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.41■□□□□ 0.38
FOXC2Q99958 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.41■□□□□ 0.38
FOXC2Q99958 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FOXC2Q99958 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.41■□□□□ 0.38
FOXC2Q99958 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FOXC2Q99958 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FOXC2Q99958 AC105020.6-201ENST00000621523 1217 ntBASIC17.41■□□□□ 0.38
FOXC2Q99958 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.41■□□□□ 0.38
FOXC2Q99958 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FOXC2Q99958 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FOXC2Q99958 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
FOXC2Q99958 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
FOXC2Q99958 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FOXC2Q99958 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FOXC2Q99958 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
FOXC2Q99958 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FOXC2Q99958 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FOXC2Q99958 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
FOXC2Q99958 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
FOXC2Q99958 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
FOXC2Q99958 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.4■□□□□ 0.38
FOXC2Q99958 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
FOXC2Q99958 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FOXC2Q99958 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FOXC2Q99958 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
FOXC2Q99958 MMP23A-201ENST00000234610 1017 ntBASIC17.4■□□□□ 0.38
FOXC2Q99958 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
FOXC2Q99958 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
FOXC2Q99958 AC007322.3-201ENST00000426526 701 ntBASIC17.4■□□□□ 0.38
FOXC2Q99958 AC120498.8-201ENST00000614275 531 ntBASIC17.4■□□□□ 0.38
FOXC2Q99958 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
FOXC2Q99958 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
FOXC2Q99958 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
FOXC2Q99958 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FOXC2Q99958 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
FOXC2Q99958 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
FOXC2Q99958 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC17.4■□□□□ 0.38
FOXC2Q99958 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
FOXC2Q99958 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
FOXC2Q99958 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC17.4■□□□□ 0.38
FOXC2Q99958 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
FOXC2Q99958 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
FOXC2Q99958 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.4■□□□□ 0.38
FOXC2Q99958 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC17.39■□□□□ 0.38
FOXC2Q99958 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.39■□□□□ 0.38
FOXC2Q99958 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FOXC2Q99958 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC17.39■□□□□ 0.37
FOXC2Q99958 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
FOXC2Q99958 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
FOXC2Q99958 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
FOXC2Q99958 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC17.39■□□□□ 0.37
FOXC2Q99958 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FOXC2Q99958 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
FOXC2Q99958 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
FOXC2Q99958 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
FOXC2Q99958 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
FOXC2Q99958 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
FOXC2Q99958 C2orf69P4-201ENST00000565394 541 ntBASIC17.39■□□□□ 0.37
FOXC2Q99958 AC026471.5-201ENST00000615068 467 ntBASIC17.39■□□□□ 0.37
FOXC2Q99958 ANOS2P-203ENST00000472227 1816 ntBASIC17.39■□□□□ 0.37
FOXC2Q99958 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
FOXC2Q99958 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
FOXC2Q99958 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
FOXC2Q99958 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
FOXC2Q99958 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
FOXC2Q99958 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
FOXC2Q99958 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.39■□□□□ 0.37
FOXC2Q99958 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms