Protein–RNA interactions for Protein: Q99741

CDC6, Cell division control protein 6 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6Q99741 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDC6Q99741 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CDC6Q99741 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDC6Q99741 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDC6Q99741 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.99■□□□□ 0.79
CDC6Q99741 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDC6Q99741 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.99■□□□□ 0.79
CDC6Q99741 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDC6Q99741 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.99■□□□□ 0.79
CDC6Q99741 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.99■□□□□ 0.79
CDC6Q99741 AC239809.2-201ENST00000415381 517 ntBASIC19.99■□□□□ 0.79
CDC6Q99741 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDC6Q99741 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.99■□□□□ 0.79
CDC6Q99741 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDC6Q99741 C2orf69P4-201ENST00000565394 541 ntBASIC19.99■□□□□ 0.79
CDC6Q99741 AC124016.1-201ENST00000609552 612 ntBASIC19.99■□□□□ 0.79
CDC6Q99741 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDC6Q99741 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDC6Q99741 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDC6Q99741 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CDC6Q99741 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.99■□□□□ 0.79
CDC6Q99741 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDC6Q99741 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.99■□□□□ 0.79
CDC6Q99741 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDC6Q99741 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDC6Q99741 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.98■□□□□ 0.79
CDC6Q99741 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDC6Q99741 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDC6Q99741 C11orf96-202ENST00000528572 1834 ntBASIC19.98■□□□□ 0.79
CDC6Q99741 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CDC6Q99741 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDC6Q99741 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDC6Q99741 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CDC6Q99741 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDC6Q99741 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.98■□□□□ 0.79
CDC6Q99741 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.98■□□□□ 0.79
CDC6Q99741 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDC6Q99741 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.98■□□□□ 0.79
CDC6Q99741 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDC6Q99741 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDC6Q99741 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
CDC6Q99741 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.98■□□□□ 0.79
CDC6Q99741 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDC6Q99741 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDC6Q99741 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDC6Q99741 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDC6Q99741 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDC6Q99741 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDC6Q99741 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDC6Q99741 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDC6Q99741 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.97■□□□□ 0.79
CDC6Q99741 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDC6Q99741 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.97■□□□□ 0.79
CDC6Q99741 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDC6Q99741 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.97■□□□□ 0.79
CDC6Q99741 AC110285.5-201ENST00000611501 352 ntBASIC19.97■□□□□ 0.79
CDC6Q99741 AL023875.1-201ENST00000640777 796 ntBASIC19.97■□□□□ 0.79
CDC6Q99741 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.97■□□□□ 0.79
CDC6Q99741 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDC6Q99741 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDC6Q99741 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.97■□□□□ 0.79
CDC6Q99741 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDC6Q99741 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CDC6Q99741 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDC6Q99741 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDC6Q99741 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDC6Q99741 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDC6Q99741 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.96■□□□□ 0.79
CDC6Q99741 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.96■□□□□ 0.79
CDC6Q99741 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.96■□□□□ 0.79
CDC6Q99741 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.96■□□□□ 0.79
CDC6Q99741 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.96■□□□□ 0.79
CDC6Q99741 AC120498.8-201ENST00000614275 531 ntBASIC19.96■□□□□ 0.79
CDC6Q99741 AC133561.5-201ENST00000635547 218 ntBASIC19.96■□□□□ 0.79
CDC6Q99741 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDC6Q99741 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDC6Q99741 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDC6Q99741 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDC6Q99741 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDC6Q99741 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDC6Q99741 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.95■□□□□ 0.78
CDC6Q99741 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDC6Q99741 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDC6Q99741 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CDC6Q99741 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDC6Q99741 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.95■□□□□ 0.78
CDC6Q99741 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDC6Q99741 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDC6Q99741 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.95■□□□□ 0.78
CDC6Q99741 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDC6Q99741 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.95■□□□□ 0.78
CDC6Q99741 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CDC6Q99741 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CDC6Q99741 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.95■□□□□ 0.78
CDC6Q99741 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.95■□□□□ 0.78
CDC6Q99741 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.95■□□□□ 0.78
CDC6Q99741 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.95■□□□□ 0.78
CDC6Q99741 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.95■□□□□ 0.78
CDC6Q99741 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.95■□□□□ 0.78
CDC6Q99741 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms