Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL13Q99616 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL13Q99616 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CCL13Q99616 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.26■□□□□ 0.35
CCL13Q99616 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCL13Q99616 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.26■□□□□ 0.35
CCL13Q99616 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCL13Q99616 AC007322.4-201ENST00000509611 723 ntBASIC17.26■□□□□ 0.35
CCL13Q99616 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.26■□□□□ 0.35
CCL13Q99616 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CCL13Q99616 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.26■□□□□ 0.35
CCL13Q99616 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL13Q99616 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL13Q99616 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CCL13Q99616 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.26■□□□□ 0.35
CCL13Q99616 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL13Q99616 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL13Q99616 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL13Q99616 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL13Q99616 AC116050.2-201ENST00000612102 1779 ntBASIC17.25■□□□□ 0.35
CCL13Q99616 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCL13Q99616 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCL13Q99616 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCL13Q99616 AC068338.2-201ENST00000563278 1430 ntBASIC17.25■□□□□ 0.35
CCL13Q99616 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCL13Q99616 CDV3P1-201ENST00000471403 739 ntBASIC17.25■□□□□ 0.35
CCL13Q99616 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCL13Q99616 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.25■□□□□ 0.35
CCL13Q99616 AC005181.1-201ENST00000604782 1256 ntBASIC17.25■□□□□ 0.35
CCL13Q99616 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.25■□□□□ 0.35
CCL13Q99616 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCL13Q99616 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCL13Q99616 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCL13Q99616 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCL13Q99616 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.25■□□□□ 0.35
CCL13Q99616 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCL13Q99616 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.25■□□□□ 0.35
CCL13Q99616 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL13Q99616 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL13Q99616 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL13Q99616 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CCL13Q99616 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL13Q99616 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL13Q99616 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL13Q99616 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL13Q99616 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.24■□□□□ 0.35
CCL13Q99616 AC007322.3-201ENST00000426526 701 ntBASIC17.24■□□□□ 0.35
CCL13Q99616 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.24■□□□□ 0.35
CCL13Q99616 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCL13Q99616 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.24■□□□□ 0.35
CCL13Q99616 RAP2CP1-201ENST00000605103 478 ntBASIC17.24■□□□□ 0.35
CCL13Q99616 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCL13Q99616 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCL13Q99616 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.24■□□□□ 0.35
CCL13Q99616 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.24■□□□□ 0.35
CCL13Q99616 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL13Q99616 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCL13Q99616 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL13Q99616 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCL13Q99616 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CCL13Q99616 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.23■□□□□ 0.35
CCL13Q99616 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCL13Q99616 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCL13Q99616 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCL13Q99616 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCL13Q99616 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCL13Q99616 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCL13Q99616 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCL13Q99616 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.23■□□□□ 0.35
CCL13Q99616 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CCL13Q99616 AC016405.3-201ENST00000607710 860 ntBASIC17.23■□□□□ 0.35
CCL13Q99616 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.23■□□□□ 0.35
CCL13Q99616 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.23■□□□□ 0.35
CCL13Q99616 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCL13Q99616 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCL13Q99616 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCL13Q99616 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
CCL13Q99616 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.23■□□□□ 0.35
CCL13Q99616 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CCL13Q99616 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCL13Q99616 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCL13Q99616 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.23■□□□□ 0.35
CCL13Q99616 AC011484.1-201ENST00000377652 1995 ntBASIC17.22■□□□□ 0.35
CCL13Q99616 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CCL13Q99616 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CCL13Q99616 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL13Q99616 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL13Q99616 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL13Q99616 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL13Q99616 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.22■□□□□ 0.35
CCL13Q99616 MIR663A-201ENST00000385250 93 ntBASIC17.22■□□□□ 0.35
CCL13Q99616 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CCL13Q99616 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL13Q99616 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL13Q99616 CYP2T1P-201ENST00000432607 1285 ntBASIC17.22■□□□□ 0.35
CCL13Q99616 AC090192.1-201ENST00000517740 490 ntBASIC17.22■□□□□ 0.35
CCL13Q99616 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.22■□□□□ 0.35
CCL13Q99616 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.22■□□□□ 0.35
CCL13Q99616 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CCL13Q99616 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms