Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.71■□□□□ 0.58
SNX18Q96RF0 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX18Q96RF0 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
SNX18Q96RF0 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX18Q96RF0 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX18Q96RF0 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX18Q96RF0 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SNX18Q96RF0 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SNX18Q96RF0 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SNX18Q96RF0 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX18Q96RF0 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX18Q96RF0 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX18Q96RF0 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SNX18Q96RF0 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.7■□□□□ 0.58
SNX18Q96RF0 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.7■□□□□ 0.58
SNX18Q96RF0 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.7■□□□□ 0.58
SNX18Q96RF0 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX18Q96RF0 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX18Q96RF0 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SNX18Q96RF0 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SNX18Q96RF0 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.7■□□□□ 0.58
SNX18Q96RF0 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX18Q96RF0 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SNX18Q96RF0 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX18Q96RF0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.69■□□□□ 0.58
SNX18Q96RF0 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SNX18Q96RF0 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SNX18Q96RF0 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SNX18Q96RF0 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
SNX18Q96RF0 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX18Q96RF0 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
SNX18Q96RF0 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.69■□□□□ 0.58
SNX18Q96RF0 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.69■□□□□ 0.58
SNX18Q96RF0 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.69■□□□□ 0.58
SNX18Q96RF0 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.69■□□□□ 0.58
SNX18Q96RF0 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.69■□□□□ 0.58
SNX18Q96RF0 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX18Q96RF0 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX18Q96RF0 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SNX18Q96RF0 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX18Q96RF0 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SNX18Q96RF0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SNX18Q96RF0 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.69■□□□□ 0.58
SNX18Q96RF0 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX18Q96RF0 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX18Q96RF0 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.69■□□□□ 0.58
SNX18Q96RF0 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SNX18Q96RF0 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX18Q96RF0 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX18Q96RF0 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
SNX18Q96RF0 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX18Q96RF0 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX18Q96RF0 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNX18Q96RF0 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX18Q96RF0 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.68■□□□□ 0.58
SNX18Q96RF0 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.68■□□□□ 0.58
SNX18Q96RF0 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNX18Q96RF0 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.68■□□□□ 0.58
SNX18Q96RF0 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.68■□□□□ 0.58
SNX18Q96RF0 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.68■□□□□ 0.58
SNX18Q96RF0 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.68■□□□□ 0.58
SNX18Q96RF0 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX18Q96RF0 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
SNX18Q96RF0 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.68■□□□□ 0.58
SNX18Q96RF0 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
SNX18Q96RF0 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX18Q96RF0 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
SNX18Q96RF0 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX18Q96RF0 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX18Q96RF0 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX18Q96RF0 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX18Q96RF0 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SNX18Q96RF0 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX18Q96RF0 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX18Q96RF0 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.67■□□□□ 0.58
SNX18Q96RF0 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX18Q96RF0 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.67■□□□□ 0.58
SNX18Q96RF0 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.67■□□□□ 0.58
SNX18Q96RF0 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SNX18Q96RF0 EEF1DP3-203ENST00000566025 782 ntBASIC18.67■□□□□ 0.58
SNX18Q96RF0 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
SNX18Q96RF0 AC053503.5-201ENST00000601508 636 ntBASIC18.67■□□□□ 0.58
SNX18Q96RF0 AL354811.1-201ENST00000610286 706 ntBASIC18.67■□□□□ 0.58
SNX18Q96RF0 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SNX18Q96RF0 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX18Q96RF0 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SNX18Q96RF0 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.67■□□□□ 0.58
SNX18Q96RF0 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX18Q96RF0 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SNX18Q96RF0 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.67■□□□□ 0.58
SNX18Q96RF0 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX18Q96RF0 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.66■□□□□ 0.58
SNX18Q96RF0 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX18Q96RF0 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX18Q96RF0 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX18Q96RF0 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX18Q96RF0 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX18Q96RF0 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.66■□□□□ 0.58
SNX18Q96RF0 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.66■□□□□ 0.58
SNX18Q96RF0 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms