Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 AC087633.2-202ENST00000565166 1439 ntBASIC22.16■■□□□ 1.14
CASD1Q96PB1 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CASD1Q96PB1 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
CASD1Q96PB1 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CASD1Q96PB1 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CASD1Q96PB1 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
CASD1Q96PB1 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
CASD1Q96PB1 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CASD1Q96PB1 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CASD1Q96PB1 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
CASD1Q96PB1 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CASD1Q96PB1 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CASD1Q96PB1 GUSBP5-202ENST00000510805 1989 ntBASIC22.16■■□□□ 1.14
CASD1Q96PB1 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CASD1Q96PB1 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CASD1Q96PB1 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC22.15■■□□□ 1.14
CASD1Q96PB1 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CASD1Q96PB1 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC22.15■■□□□ 1.14
CASD1Q96PB1 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
CASD1Q96PB1 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CASD1Q96PB1 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CASD1Q96PB1 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CASD1Q96PB1 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC22.15■■□□□ 1.14
CASD1Q96PB1 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
CASD1Q96PB1 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
CASD1Q96PB1 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
CASD1Q96PB1 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
CASD1Q96PB1 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC22.15■■□□□ 1.14
CASD1Q96PB1 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
CASD1Q96PB1 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC22.15■■□□□ 1.14
CASD1Q96PB1 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC22.15■■□□□ 1.14
CASD1Q96PB1 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
CASD1Q96PB1 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.15■■□□□ 1.14
CASD1Q96PB1 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC22.14■■□□□ 1.14
CASD1Q96PB1 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CASD1Q96PB1 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC22.14■■□□□ 1.14
CASD1Q96PB1 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.14■■□□□ 1.14
CASD1Q96PB1 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
CASD1Q96PB1 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC22.14■■□□□ 1.14
CASD1Q96PB1 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CASD1Q96PB1 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
CASD1Q96PB1 POM121L13P-201ENST00000422362 380 ntBASIC22.14■■□□□ 1.13
CASD1Q96PB1 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC22.14■■□□□ 1.13
CASD1Q96PB1 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC22.14■■□□□ 1.13
CASD1Q96PB1 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC22.14■■□□□ 1.13
CASD1Q96PB1 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC22.14■■□□□ 1.13
CASD1Q96PB1 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
CASD1Q96PB1 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC22.14■■□□□ 1.13
CASD1Q96PB1 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CASD1Q96PB1 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
CASD1Q96PB1 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CASD1Q96PB1 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC22.14■■□□□ 1.13
CASD1Q96PB1 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CASD1Q96PB1 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CASD1Q96PB1 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
CASD1Q96PB1 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC22.13■■□□□ 1.13
CASD1Q96PB1 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CASD1Q96PB1 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC22.13■■□□□ 1.13
CASD1Q96PB1 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CASD1Q96PB1 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CASD1Q96PB1 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC22.13■■□□□ 1.13
CASD1Q96PB1 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CASD1Q96PB1 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC22.13■■□□□ 1.13
CASD1Q96PB1 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CASD1Q96PB1 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CASD1Q96PB1 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CASD1Q96PB1 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CASD1Q96PB1 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC22.12■■□□□ 1.13
CASD1Q96PB1 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
CASD1Q96PB1 SPIB-206ENST00000596074 847 ntTSL 2 BASIC22.12■■□□□ 1.13
CASD1Q96PB1 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC22.12■■□□□ 1.13
CASD1Q96PB1 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CASD1Q96PB1 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CASD1Q96PB1 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CASD1Q96PB1 AC233723.2-201ENST00000623798 2106 ntBASIC22.12■■□□□ 1.13
CASD1Q96PB1 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CASD1Q96PB1 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CASD1Q96PB1 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CASD1Q96PB1 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CASD1Q96PB1 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CASD1Q96PB1 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CASD1Q96PB1 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC22.11■■□□□ 1.13
CASD1Q96PB1 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC22.11■■□□□ 1.13
CASD1Q96PB1 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC22.11■■□□□ 1.13
CASD1Q96PB1 Z99916.2-201ENST00000604037 246 ntBASIC22.11■■□□□ 1.13
CASD1Q96PB1 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
CASD1Q96PB1 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC22.11■■□□□ 1.13
CASD1Q96PB1 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC22.11■■□□□ 1.13
CASD1Q96PB1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC22.11■■□□□ 1.13
CASD1Q96PB1 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CASD1Q96PB1 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.1■■□□□ 1.13
CASD1Q96PB1 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CASD1Q96PB1 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CASD1Q96PB1 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CASD1Q96PB1 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
CASD1Q96PB1 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CASD1Q96PB1 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CASD1Q96PB1 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CASD1Q96PB1 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CASD1Q96PB1 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms