Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC46A1Q96NT5 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.78■□□□□ 0.76
SLC46A1Q96NT5 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC46A1Q96NT5 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC46A1Q96NT5 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
SLC46A1Q96NT5 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
SLC46A1Q96NT5 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
SLC46A1Q96NT5 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SLC46A1Q96NT5 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC46A1Q96NT5 AC026471.6-201ENST00000622954 1905 ntBASIC19.77■□□□□ 0.76
SLC46A1Q96NT5 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC46A1Q96NT5 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC46A1Q96NT5 AC245052.3-201ENST00000450182 901 ntBASIC19.77■□□□□ 0.76
SLC46A1Q96NT5 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.77■□□□□ 0.76
SLC46A1Q96NT5 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.77■□□□□ 0.76
SLC46A1Q96NT5 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.77■□□□□ 0.76
SLC46A1Q96NT5 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC46A1Q96NT5 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLC46A1Q96NT5 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.77■□□□□ 0.76
SLC46A1Q96NT5 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SLC46A1Q96NT5 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
SLC46A1Q96NT5 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.75
SLC46A1Q96NT5 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
SLC46A1Q96NT5 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC46A1Q96NT5 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLC46A1Q96NT5 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC46A1Q96NT5 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLC46A1Q96NT5 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC46A1Q96NT5 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC46A1Q96NT5 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLC46A1Q96NT5 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.76■□□□□ 0.75
SLC46A1Q96NT5 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
SLC46A1Q96NT5 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC46A1Q96NT5 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC46A1Q96NT5 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC46A1Q96NT5 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.76■□□□□ 0.75
SLC46A1Q96NT5 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.76■□□□□ 0.75
SLC46A1Q96NT5 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.76■□□□□ 0.75
SLC46A1Q96NT5 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLC46A1Q96NT5 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
SLC46A1Q96NT5 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLC46A1Q96NT5 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLC46A1Q96NT5 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.76■□□□□ 0.75
SLC46A1Q96NT5 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC46A1Q96NT5 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC46A1Q96NT5 AC092368.3-202ENST00000574180 1591 ntBASIC19.75■□□□□ 0.75
SLC46A1Q96NT5 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC46A1Q96NT5 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SLC46A1Q96NT5 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
SLC46A1Q96NT5 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.75■□□□□ 0.75
SLC46A1Q96NT5 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.75■□□□□ 0.75
SLC46A1Q96NT5 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.75■□□□□ 0.75
SLC46A1Q96NT5 AC073912.3-201ENST00000624414 853 ntBASIC19.75■□□□□ 0.75
SLC46A1Q96NT5 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.75■□□□□ 0.75
SLC46A1Q96NT5 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SLC46A1Q96NT5 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC46A1Q96NT5 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.75■□□□□ 0.75
SLC46A1Q96NT5 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLC46A1Q96NT5 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.75■□□□□ 0.75
SLC46A1Q96NT5 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SLC46A1Q96NT5 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SLC46A1Q96NT5 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.74■□□□□ 0.75
SLC46A1Q96NT5 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.74■□□□□ 0.75
SLC46A1Q96NT5 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC46A1Q96NT5 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC46A1Q96NT5 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC46A1Q96NT5 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SLC46A1Q96NT5 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC46A1Q96NT5 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLC46A1Q96NT5 KRT18P68-201ENST00000392293 1000 ntBASIC19.74■□□□□ 0.75
SLC46A1Q96NT5 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
SLC46A1Q96NT5 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.74■□□□□ 0.75
SLC46A1Q96NT5 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
SLC46A1Q96NT5 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SLC46A1Q96NT5 Z99916.2-201ENST00000604037 246 ntBASIC19.74■□□□□ 0.75
SLC46A1Q96NT5 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SLC46A1Q96NT5 AC010542.4-201ENST00000563151 1910 ntBASIC19.74■□□□□ 0.75
SLC46A1Q96NT5 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SLC46A1Q96NT5 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
SLC46A1Q96NT5 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC46A1Q96NT5 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC46A1Q96NT5 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLC46A1Q96NT5 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.73■□□□□ 0.75
SLC46A1Q96NT5 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
SLC46A1Q96NT5 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLC46A1Q96NT5 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLC46A1Q96NT5 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC46A1Q96NT5 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC46A1Q96NT5 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLC46A1Q96NT5 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.73■□□□□ 0.75
SLC46A1Q96NT5 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.73■□□□□ 0.75
SLC46A1Q96NT5 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SLC46A1Q96NT5 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.73■□□□□ 0.75
SLC46A1Q96NT5 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.73■□□□□ 0.75
SLC46A1Q96NT5 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.73■□□□□ 0.75
SLC46A1Q96NT5 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
SLC46A1Q96NT5 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.73■□□□□ 0.75
SLC46A1Q96NT5 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC46A1Q96NT5 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC46A1Q96NT5 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms