Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LINC00479Q96M42 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC15.72■□□□□ 0.11
LINC00479Q96M42 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC15.72■□□□□ 0.11
LINC00479Q96M42 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC15.72■□□□□ 0.11
LINC00479Q96M42 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LINC00479Q96M42 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC15.72■□□□□ 0.11
LINC00479Q96M42 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
LINC00479Q96M42 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LINC00479Q96M42 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LINC00479Q96M42 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LINC00479Q96M42 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LINC00479Q96M42 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC15.71■□□□□ 0.11
LINC00479Q96M42 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
LINC00479Q96M42 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LINC00479Q96M42 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC15.71■□□□□ 0.11
LINC00479Q96M42 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LINC00479Q96M42 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LINC00479Q96M42 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LINC00479Q96M42 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
LINC00479Q96M42 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC15.71■□□□□ 0.11
LINC00479Q96M42 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LINC00479Q96M42 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC15.71■□□□□ 0.11
LINC00479Q96M42 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LINC00479Q96M42 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
LINC00479Q96M42 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
LINC00479Q96M42 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LINC00479Q96M42 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LINC00479Q96M42 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC15.71■□□□□ 0.11
LINC00479Q96M42 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
LINC00479Q96M42 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC15.71■□□□□ 0.11
LINC00479Q96M42 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LINC00479Q96M42 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC15.71■□□□□ 0.1
LINC00479Q96M42 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
LINC00479Q96M42 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
LINC00479Q96M42 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00479Q96M42 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
LINC00479Q96M42 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
LINC00479Q96M42 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC15.7■□□□□ 0.1
LINC00479Q96M42 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
LINC00479Q96M42 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC15.7■□□□□ 0.1
LINC00479Q96M42 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00479Q96M42 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00479Q96M42 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
LINC00479Q96M42 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00479Q96M42 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00479Q96M42 AC098818.2-201ENST00000564925 2320 ntBASIC15.7■□□□□ 0.1
LINC00479Q96M42 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00479Q96M42 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
LINC00479Q96M42 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00479Q96M42 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
LINC00479Q96M42 CREM-229ENST00000474362 1030 ntTSL 2 BASIC15.7■□□□□ 0.1
LINC00479Q96M42 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC15.7■□□□□ 0.1
LINC00479Q96M42 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC15.7■□□□□ 0.1
LINC00479Q96M42 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC15.7■□□□□ 0.1
LINC00479Q96M42 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC15.7■□□□□ 0.1
LINC00479Q96M42 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00479Q96M42 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00479Q96M42 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00479Q96M42 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00479Q96M42 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC15.7■□□□□ 0.1
LINC00479Q96M42 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00479Q96M42 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
LINC00479Q96M42 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00479Q96M42 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00479Q96M42 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00479Q96M42 PXK-203ENST00000383715 1756 ntTSL 5 BASIC15.7■□□□□ 0.1
LINC00479Q96M42 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00479Q96M42 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00479Q96M42 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC15.69■□□□□ 0.1
LINC00479Q96M42 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00479Q96M42 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
LINC00479Q96M42 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00479Q96M42 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC15.69■□□□□ 0.1
LINC00479Q96M42 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00479Q96M42 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00479Q96M42 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00479Q96M42 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00479Q96M42 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00479Q96M42 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
LINC00479Q96M42 AC009299.2-201ENST00000482477 511 ntBASIC15.69■□□□□ 0.1
LINC00479Q96M42 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC15.69■□□□□ 0.1
LINC00479Q96M42 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC15.69■□□□□ 0.1
LINC00479Q96M42 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC15.69■□□□□ 0.1
LINC00479Q96M42 RASSF1-AS1-201ENST00000629828 790 ntBASIC15.69■□□□□ 0.1
LINC00479Q96M42 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00479Q96M42 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
LINC00479Q96M42 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
LINC00479Q96M42 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
LINC00479Q96M42 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
LINC00479Q96M42 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
LINC00479Q96M42 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00479Q96M42 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00479Q96M42 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC15.69■□□□□ 0.1
LINC00479Q96M42 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00479Q96M42 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00479Q96M42 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00479Q96M42 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00479Q96M42 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
LINC00479Q96M42 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00479Q96M42 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms