Protein–RNA interactions for Protein: Q96JP9

CDHR1, Cadherin-related family member 1, humanhuman

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR1Q96JP9 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CDHR1Q96JP9 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDHR1Q96JP9 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CDHR1Q96JP9 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
CDHR1Q96JP9 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDHR1Q96JP9 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.19■■□□□ 1.3
CDHR1Q96JP9 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC23.19■■□□□ 1.3
CDHR1Q96JP9 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDHR1Q96JP9 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC23.19■■□□□ 1.3
CDHR1Q96JP9 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDHR1Q96JP9 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDHR1Q96JP9 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDHR1Q96JP9 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDHR1Q96JP9 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDHR1Q96JP9 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC23.19■■□□□ 1.3
CDHR1Q96JP9 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDHR1Q96JP9 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
CDHR1Q96JP9 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC23.19■■□□□ 1.3
CDHR1Q96JP9 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDHR1Q96JP9 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDHR1Q96JP9 TMEM191A-211ENST00000637163 1067 ntBASIC23.19■■□□□ 1.3
CDHR1Q96JP9 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
CDHR1Q96JP9 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CDHR1Q96JP9 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDHR1Q96JP9 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDHR1Q96JP9 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC23.18■■□□□ 1.3
CDHR1Q96JP9 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDHR1Q96JP9 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDHR1Q96JP9 AC011484.1-201ENST00000377652 1995 ntBASIC23.18■■□□□ 1.3
CDHR1Q96JP9 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CDHR1Q96JP9 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDHR1Q96JP9 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC23.18■■□□□ 1.3
CDHR1Q96JP9 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDHR1Q96JP9 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CDHR1Q96JP9 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CDHR1Q96JP9 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CDHR1Q96JP9 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC23.18■■□□□ 1.3
CDHR1Q96JP9 INO80E-214ENST00000620599 515 ntTSL 2 BASIC23.18■■□□□ 1.3
CDHR1Q96JP9 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
CDHR1Q96JP9 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
CDHR1Q96JP9 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
CDHR1Q96JP9 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC23.17■■□□□ 1.3
CDHR1Q96JP9 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC23.17■■□□□ 1.3
CDHR1Q96JP9 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
CDHR1Q96JP9 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC23.17■■□□□ 1.3
CDHR1Q96JP9 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDHR1Q96JP9 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDHR1Q96JP9 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDHR1Q96JP9 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDHR1Q96JP9 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC23.17■■□□□ 1.3
CDHR1Q96JP9 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
CDHR1Q96JP9 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CDHR1Q96JP9 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CDHR1Q96JP9 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC23.17■■□□□ 1.3
CDHR1Q96JP9 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC23.17■■□□□ 1.3
CDHR1Q96JP9 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC23.17■■□□□ 1.3
CDHR1Q96JP9 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDHR1Q96JP9 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC23.16■■□□□ 1.3
CDHR1Q96JP9 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC23.16■■□□□ 1.3
CDHR1Q96JP9 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC23.16■■□□□ 1.3
CDHR1Q96JP9 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDHR1Q96JP9 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC23.16■■□□□ 1.3
CDHR1Q96JP9 POU5F1P3-201ENST00000428824 1078 ntBASIC23.16■■□□□ 1.3
CDHR1Q96JP9 GATS-209ENST00000454084 1030 ntTSL 3 BASIC23.16■■□□□ 1.3
CDHR1Q96JP9 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC23.16■■□□□ 1.3
CDHR1Q96JP9 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC23.16■■□□□ 1.3
CDHR1Q96JP9 HLA-B-256ENST00000639848 1089 ntBASIC23.16■■□□□ 1.3
CDHR1Q96JP9 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC23.16■■□□□ 1.3
CDHR1Q96JP9 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC23.16■■□□□ 1.3
CDHR1Q96JP9 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC23.16■■□□□ 1.3
CDHR1Q96JP9 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDHR1Q96JP9 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDHR1Q96JP9 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDHR1Q96JP9 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDHR1Q96JP9 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDHR1Q96JP9 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC23.15■■□□□ 1.3
CDHR1Q96JP9 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC23.15■■□□□ 1.3
CDHR1Q96JP9 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDHR1Q96JP9 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CDHR1Q96JP9 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDHR1Q96JP9 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC23.15■■□□□ 1.3
CDHR1Q96JP9 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC23.15■■□□□ 1.3
CDHR1Q96JP9 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CDHR1Q96JP9 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.15■■□□□ 1.3
CDHR1Q96JP9 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDHR1Q96JP9 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDHR1Q96JP9 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC23.15■■□□□ 1.3
CDHR1Q96JP9 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC23.15■■□□□ 1.3
CDHR1Q96JP9 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
CDHR1Q96JP9 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC23.15■■□□□ 1.3
CDHR1Q96JP9 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDHR1Q96JP9 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
CDHR1Q96JP9 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CDHR1Q96JP9 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CDHR1Q96JP9 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC23.14■■□□□ 1.29
CDHR1Q96JP9 GAS7-202ENST00000396115 929 ntTSL 5 BASIC23.14■■□□□ 1.29
CDHR1Q96JP9 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC23.14■■□□□ 1.29
CDHR1Q96JP9 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC23.14■■□□□ 1.29
CDHR1Q96JP9 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC23.14■■□□□ 1.29
CDHR1Q96JP9 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms