Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SMARCD1Q96GM5 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
SMARCD1Q96GM5 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SMARCD1Q96GM5 AC011484.1-201ENST00000377652 1995 ntBASIC21.76■■□□□ 1.07
SMARCD1Q96GM5 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMARCD1Q96GM5 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMARCD1Q96GM5 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
SMARCD1Q96GM5 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMARCD1Q96GM5 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.75■■□□□ 1.07
SMARCD1Q96GM5 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.75■■□□□ 1.07
SMARCD1Q96GM5 AC026310.3-201ENST00000625186 2373 ntBASIC21.75■■□□□ 1.07
SMARCD1Q96GM5 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMARCD1Q96GM5 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.75■■□□□ 1.07
SMARCD1Q96GM5 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SMARCD1Q96GM5 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMARCD1Q96GM5 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
SMARCD1Q96GM5 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMARCD1Q96GM5 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SMARCD1Q96GM5 AC073210.2-201ENST00000430369 194 ntBASIC21.75■■□□□ 1.07
SMARCD1Q96GM5 AC069152.1-201ENST00000438030 544 ntBASIC21.75■■□□□ 1.07
SMARCD1Q96GM5 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.75■■□□□ 1.07
SMARCD1Q96GM5 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.75■■□□□ 1.07
SMARCD1Q96GM5 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
SMARCD1Q96GM5 CYP2T3P-201ENST00000601990 817 ntBASIC21.75■■□□□ 1.07
SMARCD1Q96GM5 AC092118.2-201ENST00000613495 667 ntBASIC21.75■■□□□ 1.07
SMARCD1Q96GM5 CYP21A1P-202ENST00000354927 1481 ntBASIC21.75■■□□□ 1.07
SMARCD1Q96GM5 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.75■■□□□ 1.07
SMARCD1Q96GM5 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
SMARCD1Q96GM5 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMARCD1Q96GM5 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMARCD1Q96GM5 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SMARCD1Q96GM5 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMARCD1Q96GM5 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.74■■□□□ 1.07
SMARCD1Q96GM5 AC133041.1-202ENST00000642053 222 ntBASIC21.74■■□□□ 1.07
SMARCD1Q96GM5 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMARCD1Q96GM5 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SMARCD1Q96GM5 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SMARCD1Q96GM5 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMARCD1Q96GM5 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.73■■□□□ 1.07
SMARCD1Q96GM5 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMARCD1Q96GM5 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMARCD1Q96GM5 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.73■■□□□ 1.07
SMARCD1Q96GM5 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMARCD1Q96GM5 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.73■■□□□ 1.07
SMARCD1Q96GM5 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.73■■□□□ 1.07
SMARCD1Q96GM5 AC098934.4-201ENST00000564127 592 ntBASIC21.73■■□□□ 1.07
SMARCD1Q96GM5 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.73■■□□□ 1.07
SMARCD1Q96GM5 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SMARCD1Q96GM5 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.72■■□□□ 1.07
SMARCD1Q96GM5 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMARCD1Q96GM5 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMARCD1Q96GM5 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMARCD1Q96GM5 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMARCD1Q96GM5 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.72■■□□□ 1.07
SMARCD1Q96GM5 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMARCD1Q96GM5 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMARCD1Q96GM5 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SMARCD1Q96GM5 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SMARCD1Q96GM5 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMARCD1Q96GM5 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.72■■□□□ 1.07
SMARCD1Q96GM5 AL355472.2-201ENST00000422958 438 ntBASIC21.72■■□□□ 1.07
SMARCD1Q96GM5 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.72■■□□□ 1.07
SMARCD1Q96GM5 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.72■■□□□ 1.07
SMARCD1Q96GM5 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.72■■□□□ 1.07
SMARCD1Q96GM5 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SMARCD1Q96GM5 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.72■■□□□ 1.07
SMARCD1Q96GM5 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.72■■□□□ 1.07
SMARCD1Q96GM5 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
SMARCD1Q96GM5 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.71■■□□□ 1.07
SMARCD1Q96GM5 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SMARCD1Q96GM5 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SMARCD1Q96GM5 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.71■■□□□ 1.07
SMARCD1Q96GM5 AF106564.1-201ENST00000607058 2553 ntBASIC21.71■■□□□ 1.07
SMARCD1Q96GM5 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMARCD1Q96GM5 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMARCD1Q96GM5 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMARCD1Q96GM5 LSM12P1-201ENST00000411836 588 ntBASIC21.71■■□□□ 1.07
SMARCD1Q96GM5 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.71■■□□□ 1.07
SMARCD1Q96GM5 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.71■■□□□ 1.07
SMARCD1Q96GM5 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.71■■□□□ 1.07
SMARCD1Q96GM5 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.71■■□□□ 1.07
SMARCD1Q96GM5 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.71■■□□□ 1.07
SMARCD1Q96GM5 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.71■■□□□ 1.07
SMARCD1Q96GM5 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.71■■□□□ 1.07
SMARCD1Q96GM5 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.71■■□□□ 1.07
SMARCD1Q96GM5 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.71■■□□□ 1.07
SMARCD1Q96GM5 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMARCD1Q96GM5 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SMARCD1Q96GM5 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
SMARCD1Q96GM5 KRT17P1-201ENST00000399211 1546 ntBASIC21.7■■□□□ 1.07
SMARCD1Q96GM5 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
SMARCD1Q96GM5 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMARCD1Q96GM5 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SMARCD1Q96GM5 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SMARCD1Q96GM5 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.7■■□□□ 1.06
SMARCD1Q96GM5 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
SMARCD1Q96GM5 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMARCD1Q96GM5 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
SMARCD1Q96GM5 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SMARCD1Q96GM5 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms