Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 AP000974.1-201ENST00000623909 2387 ntBASIC20.73■□□□□ 0.91
CHMP6Q96FZ7 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHMP6Q96FZ7 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHMP6Q96FZ7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHMP6Q96FZ7 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHMP6Q96FZ7 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.72■□□□□ 0.91
CHMP6Q96FZ7 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.72■□□□□ 0.91
CHMP6Q96FZ7 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.72■□□□□ 0.91
CHMP6Q96FZ7 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CHMP6Q96FZ7 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHMP6Q96FZ7 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.72■□□□□ 0.91
CHMP6Q96FZ7 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CHMP6Q96FZ7 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHMP6Q96FZ7 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CHMP6Q96FZ7 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHMP6Q96FZ7 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
CHMP6Q96FZ7 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CHMP6Q96FZ7 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP6Q96FZ7 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.71■□□□□ 0.91
CHMP6Q96FZ7 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP6Q96FZ7 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.71■□□□□ 0.91
CHMP6Q96FZ7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.71■□□□□ 0.91
CHMP6Q96FZ7 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP6Q96FZ7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.71■□□□□ 0.91
CHMP6Q96FZ7 AL117332.1-201ENST00000622628 974 ntBASIC20.71■□□□□ 0.91
CHMP6Q96FZ7 AC068587.7-201ENST00000641602 218 ntBASIC20.71■□□□□ 0.91
CHMP6Q96FZ7 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CHMP6Q96FZ7 TNXA-203ENST00000507684 2038 ntBASIC20.71■□□□□ 0.91
CHMP6Q96FZ7 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP6Q96FZ7 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP6Q96FZ7 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP6Q96FZ7 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.71■□□□□ 0.91
CHMP6Q96FZ7 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CHMP6Q96FZ7 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
CHMP6Q96FZ7 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.7■□□□□ 0.91
CHMP6Q96FZ7 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.7■□□□□ 0.9
CHMP6Q96FZ7 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHMP6Q96FZ7 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHMP6Q96FZ7 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHMP6Q96FZ7 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CHMP6Q96FZ7 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHMP6Q96FZ7 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CHMP6Q96FZ7 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHMP6Q96FZ7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CHMP6Q96FZ7 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CHMP6Q96FZ7 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.7■□□□□ 0.9
CHMP6Q96FZ7 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHMP6Q96FZ7 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHMP6Q96FZ7 FP700111.2-201ENST00000619190 1892 ntBASIC20.7■□□□□ 0.9
CHMP6Q96FZ7 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CHMP6Q96FZ7 TCF3P1-201ENST00000423021 1937 ntBASIC20.7■□□□□ 0.9
CHMP6Q96FZ7 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
CHMP6Q96FZ7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.7■□□□□ 0.9
CHMP6Q96FZ7 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHMP6Q96FZ7 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.7■□□□□ 0.9
CHMP6Q96FZ7 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP6Q96FZ7 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.69■□□□□ 0.9
CHMP6Q96FZ7 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP6Q96FZ7 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP6Q96FZ7 AL356740.2-201ENST00000601559 647 ntBASIC20.69■□□□□ 0.9
CHMP6Q96FZ7 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.69■□□□□ 0.9
CHMP6Q96FZ7 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP6Q96FZ7 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP6Q96FZ7 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP6Q96FZ7 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP6Q96FZ7 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP6Q96FZ7 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP6Q96FZ7 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.69■□□□□ 0.9
CHMP6Q96FZ7 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP6Q96FZ7 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP6Q96FZ7 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP6Q96FZ7 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP6Q96FZ7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.68■□□□□ 0.9
CHMP6Q96FZ7 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.68■□□□□ 0.9
CHMP6Q96FZ7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CHMP6Q96FZ7 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP6Q96FZ7 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP6Q96FZ7 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP6Q96FZ7 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP6Q96FZ7 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP6Q96FZ7 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CHMP6Q96FZ7 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP6Q96FZ7 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.67■□□□□ 0.9
CHMP6Q96FZ7 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.67■□□□□ 0.9
CHMP6Q96FZ7 AC004408.2-201ENST00000623613 2777 ntBASIC20.67■□□□□ 0.9
CHMP6Q96FZ7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP6Q96FZ7 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP6Q96FZ7 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP6Q96FZ7 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.67■□□□□ 0.9
CHMP6Q96FZ7 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP6Q96FZ7 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP6Q96FZ7 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP6Q96FZ7 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP6Q96FZ7 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.67■□□□□ 0.9
CHMP6Q96FZ7 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.67■□□□□ 0.9
CHMP6Q96FZ7 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP6Q96FZ7 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP6Q96FZ7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP6Q96FZ7 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP6Q96FZ7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms