Protein–RNA interactions for Protein: Q96FI4

NEIL1, Endonuclease 8-like 1, humanhuman

Predicted RBP Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1Q96FI4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.36■□□□□ 0.37
NEIL1Q96FI4 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NEIL1Q96FI4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NEIL1Q96FI4 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.36■□□□□ 0.37
NEIL1Q96FI4 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NEIL1Q96FI4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NEIL1Q96FI4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NEIL1Q96FI4 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
NEIL1Q96FI4 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NEIL1Q96FI4 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NEIL1Q96FI4 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NEIL1Q96FI4 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NEIL1Q96FI4 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.36■□□□□ 0.37
NEIL1Q96FI4 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.36■□□□□ 0.37
NEIL1Q96FI4 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.36■□□□□ 0.37
NEIL1Q96FI4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
NEIL1Q96FI4 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NEIL1Q96FI4 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NEIL1Q96FI4 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NEIL1Q96FI4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
NEIL1Q96FI4 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NEIL1Q96FI4 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NEIL1Q96FI4 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.36■□□□□ 0.37
NEIL1Q96FI4 AC026310.3-201ENST00000625186 2373 ntBASIC17.36■□□□□ 0.37
NEIL1Q96FI4 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NEIL1Q96FI4 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NEIL1Q96FI4 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NEIL1Q96FI4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.35■□□□□ 0.37
NEIL1Q96FI4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
NEIL1Q96FI4 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
NEIL1Q96FI4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.35■□□□□ 0.37
NEIL1Q96FI4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.35■□□□□ 0.37
NEIL1Q96FI4 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NEIL1Q96FI4 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NEIL1Q96FI4 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NEIL1Q96FI4 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
NEIL1Q96FI4 NCF1B-203ENST00000435988 1254 ntBASIC17.35■□□□□ 0.37
NEIL1Q96FI4 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.35■□□□□ 0.37
NEIL1Q96FI4 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.35■□□□□ 0.37
NEIL1Q96FI4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
NEIL1Q96FI4 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.35■□□□□ 0.37
NEIL1Q96FI4 AL121832.2-201ENST00000610979 668 ntBASIC17.35■□□□□ 0.37
NEIL1Q96FI4 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NEIL1Q96FI4 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.35■□□□□ 0.37
NEIL1Q96FI4 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
NEIL1Q96FI4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NEIL1Q96FI4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.35■□□□□ 0.37
NEIL1Q96FI4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NEIL1Q96FI4 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NEIL1Q96FI4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.34■□□□□ 0.37
NEIL1Q96FI4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
NEIL1Q96FI4 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
NEIL1Q96FI4 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
NEIL1Q96FI4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
NEIL1Q96FI4 GPX1P1-201ENST00000388829 606 ntBASIC17.34■□□□□ 0.37
NEIL1Q96FI4 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NEIL1Q96FI4 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NEIL1Q96FI4 HLA-L-209ENST00000420110 1011 ntBASIC17.34■□□□□ 0.37
NEIL1Q96FI4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.34■□□□□ 0.37
NEIL1Q96FI4 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.34■□□□□ 0.37
NEIL1Q96FI4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.34■□□□□ 0.37
NEIL1Q96FI4 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.34■□□□□ 0.37
NEIL1Q96FI4 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
NEIL1Q96FI4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.34■□□□□ 0.37
NEIL1Q96FI4 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NEIL1Q96FI4 AC068338.2-201ENST00000563278 1430 ntBASIC17.34■□□□□ 0.37
NEIL1Q96FI4 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
NEIL1Q96FI4 AL591742.1-201ENST00000604433 565 ntBASIC17.34■□□□□ 0.37
NEIL1Q96FI4 AC073130.3-201ENST00000624389 2278 ntBASIC17.34■□□□□ 0.37
NEIL1Q96FI4 AC008694.1-202ENST00000636953 945 ntBASIC17.34■□□□□ 0.37
NEIL1Q96FI4 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
NEIL1Q96FI4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NEIL1Q96FI4 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.33■□□□□ 0.37
NEIL1Q96FI4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NEIL1Q96FI4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NEIL1Q96FI4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NEIL1Q96FI4 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.33■□□□□ 0.37
NEIL1Q96FI4 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NEIL1Q96FI4 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
NEIL1Q96FI4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NEIL1Q96FI4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NEIL1Q96FI4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
NEIL1Q96FI4 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.33■□□□□ 0.36
NEIL1Q96FI4 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.33■□□□□ 0.36
NEIL1Q96FI4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.33■□□□□ 0.36
NEIL1Q96FI4 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NEIL1Q96FI4 AC069236.1-201ENST00000604339 616 ntBASIC17.33■□□□□ 0.36
NEIL1Q96FI4 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.33■□□□□ 0.36
NEIL1Q96FI4 AL050303.2-201ENST00000619798 666 ntBASIC17.33■□□□□ 0.36
NEIL1Q96FI4 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
NEIL1Q96FI4 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NEIL1Q96FI4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NEIL1Q96FI4 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
NEIL1Q96FI4 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
NEIL1Q96FI4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.33■□□□□ 0.36
NEIL1Q96FI4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NEIL1Q96FI4 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NEIL1Q96FI4 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.32■□□□□ 0.36
NEIL1Q96FI4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
NEIL1Q96FI4 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms