Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC26.56■■□□□ 1.84
ZNF428Q96B54 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
ZNF428Q96B54 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC26.56■■□□□ 1.84
ZNF428Q96B54 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
ZNF428Q96B54 AL591742.1-201ENST00000604433 565 ntBASIC26.56■■□□□ 1.84
ZNF428Q96B54 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
ZNF428Q96B54 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC26.56■■□□□ 1.84
ZNF428Q96B54 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
ZNF428Q96B54 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC26.56■■□□□ 1.84
ZNF428Q96B54 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
ZNF428Q96B54 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
ZNF428Q96B54 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
ZNF428Q96B54 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC26.55■■□□□ 1.84
ZNF428Q96B54 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
ZNF428Q96B54 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
ZNF428Q96B54 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC26.55■■□□□ 1.84
ZNF428Q96B54 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
ZNF428Q96B54 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC26.55■■□□□ 1.84
ZNF428Q96B54 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
ZNF428Q96B54 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC26.55■■□□□ 1.84
ZNF428Q96B54 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
ZNF428Q96B54 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
ZNF428Q96B54 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
ZNF428Q96B54 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
ZNF428Q96B54 AC006128.1-201ENST00000624704 1661 ntBASIC26.54■■□□□ 1.84
ZNF428Q96B54 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC26.54■■□□□ 1.84
ZNF428Q96B54 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
ZNF428Q96B54 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC26.54■■□□□ 1.84
ZNF428Q96B54 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
ZNF428Q96B54 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC26.54■■□□□ 1.84
ZNF428Q96B54 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
ZNF428Q96B54 AC069152.1-201ENST00000438030 544 ntBASIC26.54■■□□□ 1.84
ZNF428Q96B54 CDV3P1-201ENST00000471403 739 ntBASIC26.54■■□□□ 1.84
ZNF428Q96B54 KRT18P6-201ENST00000555540 1265 ntBASIC26.54■■□□□ 1.84
ZNF428Q96B54 FAM21FP-204ENST00000608637 956 ntBASIC26.54■■□□□ 1.84
ZNF428Q96B54 MARS-234ENST00000630571 216 ntTSL 5 BASIC26.54■■□□□ 1.84
ZNF428Q96B54 MARS-235ENST00000630803 183 ntTSL 3 BASIC26.54■■□□□ 1.84
ZNF428Q96B54 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC26.54■■□□□ 1.84
ZNF428Q96B54 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
ZNF428Q96B54 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC26.54■■□□□ 1.84
ZNF428Q96B54 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC26.54■■□□□ 1.84
ZNF428Q96B54 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
ZNF428Q96B54 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC26.53■■□□□ 1.84
ZNF428Q96B54 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC26.53■■□□□ 1.84
ZNF428Q96B54 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
ZNF428Q96B54 AC007322.3-201ENST00000426526 701 ntBASIC26.53■■□□□ 1.84
ZNF428Q96B54 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
ZNF428Q96B54 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC26.53■■□□□ 1.84
ZNF428Q96B54 AC133552.2-202ENST00000575694 574 ntBASIC26.53■■□□□ 1.84
ZNF428Q96B54 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
ZNF428Q96B54 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
ZNF428Q96B54 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC26.53■■□□□ 1.84
ZNF428Q96B54 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
ZNF428Q96B54 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
ZNF428Q96B54 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
ZNF428Q96B54 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
ZNF428Q96B54 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
ZNF428Q96B54 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC26.52■■□□□ 1.84
ZNF428Q96B54 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC26.52■■□□□ 1.84
ZNF428Q96B54 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
ZNF428Q96B54 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
ZNF428Q96B54 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
ZNF428Q96B54 MKRN4P-201ENST00000444706 1521 ntBASIC26.52■■□□□ 1.84
ZNF428Q96B54 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
ZNF428Q96B54 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC26.52■■□□□ 1.84
ZNF428Q96B54 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC26.52■■□□□ 1.84
ZNF428Q96B54 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.84
ZNF428Q96B54 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
ZNF428Q96B54 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC26.51■■□□□ 1.84
ZNF428Q96B54 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
ZNF428Q96B54 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
ZNF428Q96B54 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
ZNF428Q96B54 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
ZNF428Q96B54 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
ZNF428Q96B54 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
ZNF428Q96B54 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
ZNF428Q96B54 MIPEPP3-201ENST00000412105 444 ntBASIC26.51■■□□□ 1.83
ZNF428Q96B54 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC26.51■■□□□ 1.83
ZNF428Q96B54 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
ZNF428Q96B54 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
ZNF428Q96B54 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
ZNF428Q96B54 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
ZNF428Q96B54 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
ZNF428Q96B54 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
ZNF428Q96B54 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC26.5■■□□□ 1.83
ZNF428Q96B54 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
ZNF428Q96B54 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
ZNF428Q96B54 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
ZNF428Q96B54 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC26.5■■□□□ 1.83
ZNF428Q96B54 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
ZNF428Q96B54 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
ZNF428Q96B54 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC26.5■■□□□ 1.83
ZNF428Q96B54 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
ZNF428Q96B54 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC26.5■■□□□ 1.83
ZNF428Q96B54 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
ZNF428Q96B54 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
ZNF428Q96B54 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
ZNF428Q96B54 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC26.5■■□□□ 1.83
ZNF428Q96B54 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
ZNF428Q96B54 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC26.49■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms