Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.19■□□□□ 0.5
TMEM54Q969K7 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM54Q969K7 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TMEM54Q969K7 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.19■□□□□ 0.5
TMEM54Q969K7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.19■□□□□ 0.5
TMEM54Q969K7 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM54Q969K7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TMEM54Q969K7 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM54Q969K7 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.19■□□□□ 0.5
TMEM54Q969K7 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM54Q969K7 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM54Q969K7 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM54Q969K7 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM54Q969K7 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM54Q969K7 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.18■□□□□ 0.5
TMEM54Q969K7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TMEM54Q969K7 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.18■□□□□ 0.5
TMEM54Q969K7 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM54Q969K7 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM54Q969K7 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM54Q969K7 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
TMEM54Q969K7 CNN2P6-201ENST00000439038 900 ntBASIC18.18■□□□□ 0.5
TMEM54Q969K7 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.18■□□□□ 0.5
TMEM54Q969K7 AL162412.1-201ENST00000567129 965 ntBASIC18.18■□□□□ 0.5
TMEM54Q969K7 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.18■□□□□ 0.5
TMEM54Q969K7 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM54Q969K7 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM54Q969K7 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
TMEM54Q969K7 FAM21FP-204ENST00000608637 956 ntBASIC18.18■□□□□ 0.5
TMEM54Q969K7 AC092437.1-201ENST00000624794 1048 ntBASIC18.18■□□□□ 0.5
TMEM54Q969K7 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.18■□□□□ 0.5
TMEM54Q969K7 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TMEM54Q969K7 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM54Q969K7 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM54Q969K7 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.18■□□□□ 0.5
TMEM54Q969K7 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM54Q969K7 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM54Q969K7 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
TMEM54Q969K7 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.18■□□□□ 0.5
TMEM54Q969K7 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.18■□□□□ 0.5
TMEM54Q969K7 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM54Q969K7 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM54Q969K7 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TMEM54Q969K7 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TMEM54Q969K7 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM54Q969K7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.17■□□□□ 0.5
TMEM54Q969K7 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM54Q969K7 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM54Q969K7 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.17■□□□□ 0.5
TMEM54Q969K7 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.17■□□□□ 0.5
TMEM54Q969K7 IKBKGP1-201ENST00000612193 1073 ntBASIC18.17■□□□□ 0.5
TMEM54Q969K7 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM54Q969K7 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
TMEM54Q969K7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM54Q969K7 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM54Q969K7 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.17■□□□□ 0.5
TMEM54Q969K7 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TMEM54Q969K7 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM54Q969K7 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM54Q969K7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM54Q969K7 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM54Q969K7 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
TMEM54Q969K7 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM54Q969K7 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM54Q969K7 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.16■□□□□ 0.5
TMEM54Q969K7 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.16■□□□□ 0.5
TMEM54Q969K7 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM54Q969K7 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TMEM54Q969K7 MIR2861-201ENST00000636310 90 ntBASIC18.16■□□□□ 0.5
TMEM54Q969K7 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TMEM54Q969K7 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM54Q969K7 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM54Q969K7 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM54Q969K7 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM54Q969K7 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM54Q969K7 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM54Q969K7 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.16■□□□□ 0.5
TMEM54Q969K7 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
TMEM54Q969K7 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TMEM54Q969K7 FP700111.2-201ENST00000619190 1892 ntBASIC18.16■□□□□ 0.5
TMEM54Q969K7 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
TMEM54Q969K7 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM54Q969K7 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM54Q969K7 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM54Q969K7 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.15■□□□□ 0.5
TMEM54Q969K7 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM54Q969K7 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM54Q969K7 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TMEM54Q969K7 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM54Q969K7 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TMEM54Q969K7 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM54Q969K7 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM54Q969K7 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM54Q969K7 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM54Q969K7 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.15■□□□□ 0.5
TMEM54Q969K7 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.15■□□□□ 0.5
TMEM54Q969K7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.15■□□□□ 0.5
TMEM54Q969K7 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
TMEM54Q969K7 AC231657.2-201ENST00000624556 255 ntBASIC18.15■□□□□ 0.5
TMEM54Q969K7 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms