Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTP4A1Q93096 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PTP4A1Q93096 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
PTP4A1Q93096 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.5■□□□□ 0.55
PTP4A1Q93096 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTP4A1Q93096 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.5■□□□□ 0.55
PTP4A1Q93096 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PTP4A1Q93096 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PTP4A1Q93096 AC112907.3-201ENST00000577781 2400 ntBASIC18.5■□□□□ 0.55
PTP4A1Q93096 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTP4A1Q93096 AL354811.1-201ENST00000610286 706 ntBASIC18.5■□□□□ 0.55
PTP4A1Q93096 AL358852.1-201ENST00000623174 1268 ntBASIC18.5■□□□□ 0.55
PTP4A1Q93096 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTP4A1Q93096 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PTP4A1Q93096 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.5■□□□□ 0.55
PTP4A1Q93096 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
PTP4A1Q93096 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTP4A1Q93096 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.5■□□□□ 0.55
PTP4A1Q93096 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
PTP4A1Q93096 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PTP4A1Q93096 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.49■□□□□ 0.55
PTP4A1Q93096 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.49■□□□□ 0.55
PTP4A1Q93096 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
PTP4A1Q93096 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PTP4A1Q93096 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.49■□□□□ 0.55
PTP4A1Q93096 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTP4A1Q93096 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTP4A1Q93096 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
PTP4A1Q93096 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTP4A1Q93096 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTP4A1Q93096 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTP4A1Q93096 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.49■□□□□ 0.55
PTP4A1Q93096 AC012414.1-201ENST00000556676 535 ntBASIC18.49■□□□□ 0.55
PTP4A1Q93096 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.49■□□□□ 0.55
PTP4A1Q93096 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.49■□□□□ 0.55
PTP4A1Q93096 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTP4A1Q93096 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PTP4A1Q93096 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.49■□□□□ 0.55
PTP4A1Q93096 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PTP4A1Q93096 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.49■□□□□ 0.55
PTP4A1Q93096 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTP4A1Q93096 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.49■□□□□ 0.55
PTP4A1Q93096 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PTP4A1Q93096 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.48■□□□□ 0.55
PTP4A1Q93096 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTP4A1Q93096 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PTP4A1Q93096 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.48■□□□□ 0.55
PTP4A1Q93096 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
PTP4A1Q93096 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.48■□□□□ 0.55
PTP4A1Q93096 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTP4A1Q93096 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTP4A1Q93096 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.48■□□□□ 0.55
PTP4A1Q93096 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.48■□□□□ 0.55
PTP4A1Q93096 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PTP4A1Q93096 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.48■□□□□ 0.55
PTP4A1Q93096 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.48■□□□□ 0.55
PTP4A1Q93096 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTP4A1Q93096 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PTP4A1Q93096 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PTP4A1Q93096 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
PTP4A1Q93096 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PTP4A1Q93096 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
PTP4A1Q93096 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
PTP4A1Q93096 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PTP4A1Q93096 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PTP4A1Q93096 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTP4A1Q93096 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTP4A1Q93096 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTP4A1Q93096 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
PTP4A1Q93096 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.47■□□□□ 0.55
PTP4A1Q93096 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.47■□□□□ 0.55
PTP4A1Q93096 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.47■□□□□ 0.55
PTP4A1Q93096 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTP4A1Q93096 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.47■□□□□ 0.55
PTP4A1Q93096 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
PTP4A1Q93096 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PTP4A1Q93096 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.47■□□□□ 0.55
PTP4A1Q93096 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.47■□□□□ 0.55
PTP4A1Q93096 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTP4A1Q93096 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTP4A1Q93096 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTP4A1Q93096 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.47■□□□□ 0.55
PTP4A1Q93096 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTP4A1Q93096 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.47■□□□□ 0.55
PTP4A1Q93096 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTP4A1Q93096 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTP4A1Q93096 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTP4A1Q93096 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTP4A1Q93096 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTP4A1Q93096 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTP4A1Q93096 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTP4A1Q93096 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PTP4A1Q93096 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PTP4A1Q93096 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PTP4A1Q93096 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
PTP4A1Q93096 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.46■□□□□ 0.55
PTP4A1Q93096 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PTP4A1Q93096 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.46■□□□□ 0.55
PTP4A1Q93096 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTP4A1Q93096 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms