Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMIM4Q8WVI0 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMIM4Q8WVI0 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.63■□□□□ 0.41
SMIM4Q8WVI0 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMIM4Q8WVI0 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
SMIM4Q8WVI0 KRT8P33-201ENST00000508125 1423 ntBASIC17.63■□□□□ 0.41
SMIM4Q8WVI0 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.63■□□□□ 0.41
SMIM4Q8WVI0 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMIM4Q8WVI0 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.63■□□□□ 0.41
SMIM4Q8WVI0 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.63■□□□□ 0.41
SMIM4Q8WVI0 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.62■□□□□ 0.41
SMIM4Q8WVI0 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.62■□□□□ 0.41
SMIM4Q8WVI0 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMIM4Q8WVI0 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMIM4Q8WVI0 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
SMIM4Q8WVI0 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMIM4Q8WVI0 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.62■□□□□ 0.41
SMIM4Q8WVI0 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMIM4Q8WVI0 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.62■□□□□ 0.41
SMIM4Q8WVI0 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC17.62■□□□□ 0.41
SMIM4Q8WVI0 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.62■□□□□ 0.41
SMIM4Q8WVI0 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SMIM4Q8WVI0 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SMIM4Q8WVI0 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SMIM4Q8WVI0 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.62■□□□□ 0.41
SMIM4Q8WVI0 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMIM4Q8WVI0 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SMIM4Q8WVI0 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SMIM4Q8WVI0 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMIM4Q8WVI0 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SMIM4Q8WVI0 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SMIM4Q8WVI0 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SMIM4Q8WVI0 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.62■□□□□ 0.41
SMIM4Q8WVI0 AC004408.2-201ENST00000623613 2777 ntBASIC17.62■□□□□ 0.41
SMIM4Q8WVI0 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMIM4Q8WVI0 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.62■□□□□ 0.41
SMIM4Q8WVI0 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
SMIM4Q8WVI0 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SMIM4Q8WVI0 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMIM4Q8WVI0 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMIM4Q8WVI0 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SMIM4Q8WVI0 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMIM4Q8WVI0 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMIM4Q8WVI0 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SMIM4Q8WVI0 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMIM4Q8WVI0 GUK1-208ENST00000366728 842 ntTSL 2 BASIC17.61■□□□□ 0.41
SMIM4Q8WVI0 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SMIM4Q8WVI0 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.61■□□□□ 0.41
SMIM4Q8WVI0 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC17.61■□□□□ 0.41
SMIM4Q8WVI0 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.61■□□□□ 0.41
SMIM4Q8WVI0 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC17.61■□□□□ 0.41
SMIM4Q8WVI0 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SMIM4Q8WVI0 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
SMIM4Q8WVI0 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
SMIM4Q8WVI0 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SMIM4Q8WVI0 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMIM4Q8WVI0 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SMIM4Q8WVI0 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.6■□□□□ 0.41
SMIM4Q8WVI0 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SMIM4Q8WVI0 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.6■□□□□ 0.41
SMIM4Q8WVI0 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMIM4Q8WVI0 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SMIM4Q8WVI0 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
SMIM4Q8WVI0 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC17.6■□□□□ 0.41
SMIM4Q8WVI0 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMIM4Q8WVI0 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.6■□□□□ 0.41
SMIM4Q8WVI0 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SMIM4Q8WVI0 AC092720.2-201ENST00000602388 1665 ntBASIC17.6■□□□□ 0.41
SMIM4Q8WVI0 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SMIM4Q8WVI0 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMIM4Q8WVI0 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SMIM4Q8WVI0 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.6■□□□□ 0.41
SMIM4Q8WVI0 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.59■□□□□ 0.41
SMIM4Q8WVI0 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.59■□□□□ 0.41
SMIM4Q8WVI0 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SMIM4Q8WVI0 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.59■□□□□ 0.41
SMIM4Q8WVI0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMIM4Q8WVI0 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SMIM4Q8WVI0 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
SMIM4Q8WVI0 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SMIM4Q8WVI0 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC17.59■□□□□ 0.41
SMIM4Q8WVI0 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMIM4Q8WVI0 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMIM4Q8WVI0 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMIM4Q8WVI0 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.59■□□□□ 0.41
SMIM4Q8WVI0 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMIM4Q8WVI0 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMIM4Q8WVI0 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMIM4Q8WVI0 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMIM4Q8WVI0 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SMIM4Q8WVI0 AC011484.1-201ENST00000377652 1995 ntBASIC17.59■□□□□ 0.41
SMIM4Q8WVI0 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SMIM4Q8WVI0 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SMIM4Q8WVI0 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.58■□□□□ 0.41
SMIM4Q8WVI0 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
SMIM4Q8WVI0 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SMIM4Q8WVI0 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
SMIM4Q8WVI0 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SMIM4Q8WVI0 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC17.58■□□□□ 0.4
SMIM4Q8WVI0 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms