Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
RNF139Q8WU17 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.65■■□□□ 1.06
RNF139Q8WU17 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.65■■□□□ 1.06
RNF139Q8WU17 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF139Q8WU17 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.65■■□□□ 1.06
RNF139Q8WU17 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF139Q8WU17 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.65■■□□□ 1.06
RNF139Q8WU17 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.65■■□□□ 1.06
RNF139Q8WU17 AC083906.2-201ENST00000511578 360 ntBASIC21.65■■□□□ 1.06
RNF139Q8WU17 AF201337.1-201ENST00000520239 748 ntBASIC21.65■■□□□ 1.06
RNF139Q8WU17 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.65■■□□□ 1.06
RNF139Q8WU17 AC133552.2-202ENST00000575694 574 ntBASIC21.65■■□□□ 1.06
RNF139Q8WU17 OR10C1-204ENST00000622521 1039 ntBASIC21.65■■□□□ 1.06
RNF139Q8WU17 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RNF139Q8WU17 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RNF139Q8WU17 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.65■■□□□ 1.06
RNF139Q8WU17 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF139Q8WU17 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.65■■□□□ 1.06
RNF139Q8WU17 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RNF139Q8WU17 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
RNF139Q8WU17 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.64■■□□□ 1.06
RNF139Q8WU17 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RNF139Q8WU17 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
RNF139Q8WU17 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
RNF139Q8WU17 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.64■■□□□ 1.05
RNF139Q8WU17 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF139Q8WU17 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
RNF139Q8WU17 HLA-L-209ENST00000420110 1011 ntBASIC21.64■■□□□ 1.05
RNF139Q8WU17 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF139Q8WU17 AC105036.2-201ENST00000569468 176 ntBASIC21.64■■□□□ 1.05
RNF139Q8WU17 AL109923.1-201ENST00000618799 583 ntBASIC21.64■■□□□ 1.05
RNF139Q8WU17 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.64■■□□□ 1.05
RNF139Q8WU17 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF139Q8WU17 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RNF139Q8WU17 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.64■■□□□ 1.05
RNF139Q8WU17 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.64■■□□□ 1.05
RNF139Q8WU17 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF139Q8WU17 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF139Q8WU17 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF139Q8WU17 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
RNF139Q8WU17 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.63■■□□□ 1.05
RNF139Q8WU17 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.63■■□□□ 1.05
RNF139Q8WU17 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF139Q8WU17 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF139Q8WU17 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF139Q8WU17 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.63■■□□□ 1.05
RNF139Q8WU17 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.63■■□□□ 1.05
RNF139Q8WU17 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
RNF139Q8WU17 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF139Q8WU17 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.62■■□□□ 1.05
RNF139Q8WU17 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
RNF139Q8WU17 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF139Q8WU17 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF139Q8WU17 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
RNF139Q8WU17 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.62■■□□□ 1.05
RNF139Q8WU17 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RNF139Q8WU17 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.62■■□□□ 1.05
RNF139Q8WU17 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF139Q8WU17 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.62■■□□□ 1.05
RNF139Q8WU17 AC016405.3-201ENST00000607710 860 ntBASIC21.62■■□□□ 1.05
RNF139Q8WU17 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.62■■□□□ 1.05
RNF139Q8WU17 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF139Q8WU17 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RNF139Q8WU17 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF139Q8WU17 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF139Q8WU17 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.61■■□□□ 1.05
RNF139Q8WU17 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RNF139Q8WU17 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF139Q8WU17 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RNF139Q8WU17 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
RNF139Q8WU17 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.61■■□□□ 1.05
RNF139Q8WU17 AC007322.3-201ENST00000426526 701 ntBASIC21.61■■□□□ 1.05
RNF139Q8WU17 RARRES2P4-201ENST00000514074 484 ntBASIC21.61■■□□□ 1.05
RNF139Q8WU17 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RNF139Q8WU17 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RNF139Q8WU17 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.61■■□□□ 1.05
RNF139Q8WU17 AC116050.2-201ENST00000612102 1779 ntBASIC21.61■■□□□ 1.05
RNF139Q8WU17 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RNF139Q8WU17 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.6■■□□□ 1.05
RNF139Q8WU17 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.6■■□□□ 1.05
RNF139Q8WU17 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.6■■□□□ 1.05
RNF139Q8WU17 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RNF139Q8WU17 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RNF139Q8WU17 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RNF139Q8WU17 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RNF139Q8WU17 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RNF139Q8WU17 SLC29A4P1-201ENST00000398760 971 ntBASIC21.6■■□□□ 1.05
RNF139Q8WU17 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
RNF139Q8WU17 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.6■■□□□ 1.05
RNF139Q8WU17 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.6■■□□□ 1.05
RNF139Q8WU17 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.6■■□□□ 1.05
RNF139Q8WU17 FAM21FP-204ENST00000608637 956 ntBASIC21.6■■□□□ 1.05
RNF139Q8WU17 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
RNF139Q8WU17 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.6■■□□□ 1.05
RNF139Q8WU17 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
RNF139Q8WU17 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.6■■□□□ 1.05
RNF139Q8WU17 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF139Q8WU17 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.59■■□□□ 1.05
RNF139Q8WU17 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
RNF139Q8WU17 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms