Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PIK3C3Q8NEB9 MIR939-201ENST00000401314 82 ntBASIC19.28■□□□□ 0.68
PIK3C3Q8NEB9 AC091305.1-201ENST00000479476 895 ntBASIC19.28■□□□□ 0.68
PIK3C3Q8NEB9 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.28■□□□□ 0.68
PIK3C3Q8NEB9 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.28■□□□□ 0.68
PIK3C3Q8NEB9 AF213884.3-201ENST00000563833 479 ntBASIC19.28■□□□□ 0.68
PIK3C3Q8NEB9 AC027702.1-201ENST00000563810 1770 ntBASIC19.28■□□□□ 0.68
PIK3C3Q8NEB9 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PIK3C3Q8NEB9 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PIK3C3Q8NEB9 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PIK3C3Q8NEB9 RASA4CP-201ENST00000424092 1398 ntBASIC19.28■□□□□ 0.68
PIK3C3Q8NEB9 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PIK3C3Q8NEB9 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
PIK3C3Q8NEB9 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PIK3C3Q8NEB9 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
PIK3C3Q8NEB9 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PIK3C3Q8NEB9 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
PIK3C3Q8NEB9 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
PIK3C3Q8NEB9 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PIK3C3Q8NEB9 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PIK3C3Q8NEB9 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PIK3C3Q8NEB9 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PIK3C3Q8NEB9 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PIK3C3Q8NEB9 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
PIK3C3Q8NEB9 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.27■□□□□ 0.68
PIK3C3Q8NEB9 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PIK3C3Q8NEB9 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PIK3C3Q8NEB9 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PIK3C3Q8NEB9 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.27■□□□□ 0.68
PIK3C3Q8NEB9 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.27■□□□□ 0.68
PIK3C3Q8NEB9 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PIK3C3Q8NEB9 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.27■□□□□ 0.68
PIK3C3Q8NEB9 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PIK3C3Q8NEB9 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
PIK3C3Q8NEB9 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.27■□□□□ 0.67
PIK3C3Q8NEB9 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
PIK3C3Q8NEB9 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.27■□□□□ 0.67
PIK3C3Q8NEB9 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.27■□□□□ 0.67
PIK3C3Q8NEB9 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PIK3C3Q8NEB9 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PIK3C3Q8NEB9 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.26■□□□□ 0.67
PIK3C3Q8NEB9 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PIK3C3Q8NEB9 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.26■□□□□ 0.67
PIK3C3Q8NEB9 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PIK3C3Q8NEB9 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.26■□□□□ 0.67
PIK3C3Q8NEB9 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PIK3C3Q8NEB9 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.26■□□□□ 0.67
PIK3C3Q8NEB9 AC142381.2-201ENST00000566120 298 ntBASIC19.26■□□□□ 0.67
PIK3C3Q8NEB9 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.26■□□□□ 0.67
PIK3C3Q8NEB9 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.26■□□□□ 0.67
PIK3C3Q8NEB9 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PIK3C3Q8NEB9 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.26■□□□□ 0.67
PIK3C3Q8NEB9 AL031432.3-201ENST00000607698 485 ntBASIC19.26■□□□□ 0.67
PIK3C3Q8NEB9 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PIK3C3Q8NEB9 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PIK3C3Q8NEB9 AL020996.1-203ENST00000536896 2307 ntBASIC19.26■□□□□ 0.67
PIK3C3Q8NEB9 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.26■□□□□ 0.67
PIK3C3Q8NEB9 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PIK3C3Q8NEB9 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PIK3C3Q8NEB9 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PIK3C3Q8NEB9 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PIK3C3Q8NEB9 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
PIK3C3Q8NEB9 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PIK3C3Q8NEB9 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.25■□□□□ 0.67
PIK3C3Q8NEB9 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PIK3C3Q8NEB9 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.25■□□□□ 0.67
PIK3C3Q8NEB9 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PIK3C3Q8NEB9 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
PIK3C3Q8NEB9 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PIK3C3Q8NEB9 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PIK3C3Q8NEB9 SUDS3P1-201ENST00000505831 966 ntBASIC19.25■□□□□ 0.67
PIK3C3Q8NEB9 IGHV3-19-201ENST00000521488 291 ntBASIC19.25■□□□□ 0.67
PIK3C3Q8NEB9 AL136967.2-201ENST00000623968 743 ntBASIC19.25■□□□□ 0.67
PIK3C3Q8NEB9 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PIK3C3Q8NEB9 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PIK3C3Q8NEB9 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PIK3C3Q8NEB9 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PIK3C3Q8NEB9 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.25■□□□□ 0.67
PIK3C3Q8NEB9 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PIK3C3Q8NEB9 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PIK3C3Q8NEB9 AC020907.5-201ENST00000624372 1936 ntBASIC19.24■□□□□ 0.67
PIK3C3Q8NEB9 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PIK3C3Q8NEB9 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PIK3C3Q8NEB9 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.24■□□□□ 0.67
PIK3C3Q8NEB9 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PIK3C3Q8NEB9 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.24■□□□□ 0.67
PIK3C3Q8NEB9 AC005837.3-201ENST00000612163 286 ntBASIC19.24■□□□□ 0.67
PIK3C3Q8NEB9 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PIK3C3Q8NEB9 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
PIK3C3Q8NEB9 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.24■□□□□ 0.67
PIK3C3Q8NEB9 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PIK3C3Q8NEB9 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PIK3C3Q8NEB9 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PIK3C3Q8NEB9 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PIK3C3Q8NEB9 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PIK3C3Q8NEB9 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.24■□□□□ 0.67
PIK3C3Q8NEB9 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PIK3C3Q8NEB9 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.24■□□□□ 0.67
PIK3C3Q8NEB9 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PIK3C3Q8NEB9 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms