Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.03■□□□□ 0.48
CPEB3Q8NE35 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CPEB3Q8NE35 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CPEB3Q8NE35 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPEB3Q8NE35 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CPEB3Q8NE35 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPEB3Q8NE35 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPEB3Q8NE35 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPEB3Q8NE35 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPEB3Q8NE35 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPEB3Q8NE35 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPEB3Q8NE35 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.02■□□□□ 0.48
CPEB3Q8NE35 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.02■□□□□ 0.48
CPEB3Q8NE35 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPEB3Q8NE35 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPEB3Q8NE35 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPEB3Q8NE35 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPEB3Q8NE35 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
CPEB3Q8NE35 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPEB3Q8NE35 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.02■□□□□ 0.48
CPEB3Q8NE35 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.02■□□□□ 0.48
CPEB3Q8NE35 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.02■□□□□ 0.48
CPEB3Q8NE35 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
CPEB3Q8NE35 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.02■□□□□ 0.48
CPEB3Q8NE35 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.02■□□□□ 0.48
CPEB3Q8NE35 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CPEB3Q8NE35 BID-214ENST00000617586 542 ntTSL 5 BASIC18.02■□□□□ 0.48
CPEB3Q8NE35 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
CPEB3Q8NE35 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CPEB3Q8NE35 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CPEB3Q8NE35 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
CPEB3Q8NE35 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
CPEB3Q8NE35 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.47
CPEB3Q8NE35 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CPEB3Q8NE35 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CPEB3Q8NE35 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPEB3Q8NE35 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPEB3Q8NE35 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPEB3Q8NE35 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CPEB3Q8NE35 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPEB3Q8NE35 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CPEB3Q8NE35 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPEB3Q8NE35 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
CPEB3Q8NE35 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPEB3Q8NE35 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CPEB3Q8NE35 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CPEB3Q8NE35 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.01■□□□□ 0.47
CPEB3Q8NE35 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.01■□□□□ 0.47
CPEB3Q8NE35 DUX4L16-201ENST00000555130 1264 ntBASIC18.01■□□□□ 0.47
CPEB3Q8NE35 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CPEB3Q8NE35 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
CPEB3Q8NE35 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.01■□□□□ 0.47
CPEB3Q8NE35 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.01■□□□□ 0.47
CPEB3Q8NE35 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPEB3Q8NE35 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CPEB3Q8NE35 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPEB3Q8NE35 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CPEB3Q8NE35 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CPEB3Q8NE35 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPEB3Q8NE35 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPEB3Q8NE35 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18■□□□□ 0.47
CPEB3Q8NE35 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18■□□□□ 0.47
CPEB3Q8NE35 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18■□□□□ 0.47
CPEB3Q8NE35 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18■□□□□ 0.47
CPEB3Q8NE35 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CPEB3Q8NE35 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CPEB3Q8NE35 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CPEB3Q8NE35 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CPEB3Q8NE35 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18■□□□□ 0.47
CPEB3Q8NE35 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CPEB3Q8NE35 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CPEB3Q8NE35 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18■□□□□ 0.47
CPEB3Q8NE35 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18■□□□□ 0.47
CPEB3Q8NE35 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18■□□□□ 0.47
CPEB3Q8NE35 AC004911.1-201ENST00000416316 871 ntBASIC18■□□□□ 0.47
CPEB3Q8NE35 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18■□□□□ 0.47
CPEB3Q8NE35 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
CPEB3Q8NE35 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18■□□□□ 0.47
CPEB3Q8NE35 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CPEB3Q8NE35 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18■□□□□ 0.47
CPEB3Q8NE35 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18■□□□□ 0.47
CPEB3Q8NE35 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CPEB3Q8NE35 AC011484.1-201ENST00000377652 1995 ntBASIC18■□□□□ 0.47
CPEB3Q8NE35 RNF165-205ENST00000588679 2904 ntBASIC18■□□□□ 0.47
CPEB3Q8NE35 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18■□□□□ 0.47
CPEB3Q8NE35 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CPEB3Q8NE35 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CPEB3Q8NE35 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.99■□□□□ 0.47
CPEB3Q8NE35 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CPEB3Q8NE35 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CPEB3Q8NE35 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.99■□□□□ 0.47
CPEB3Q8NE35 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.99■□□□□ 0.47
CPEB3Q8NE35 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.99■□□□□ 0.47
CPEB3Q8NE35 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.99■□□□□ 0.47
CPEB3Q8NE35 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.99■□□□□ 0.47
CPEB3Q8NE35 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CPEB3Q8NE35 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CPEB3Q8NE35 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.99■□□□□ 0.47
CPEB3Q8NE35 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CPEB3Q8NE35 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms