Protein–RNA interactions for Protein: Q8NCS7

SLC44A5, Choline transporter-like protein 5, humanhuman

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A5Q8NCS7 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
SLC44A5Q8NCS7 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC24.35■■□□□ 1.49
SLC44A5Q8NCS7 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC24.35■■□□□ 1.49
SLC44A5Q8NCS7 BID-212ENST00000614949 1988 ntTSL 5 BASIC24.34■■□□□ 1.49
SLC44A5Q8NCS7 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SLC44A5Q8NCS7 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
SLC44A5Q8NCS7 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SLC44A5Q8NCS7 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
SLC44A5Q8NCS7 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SLC44A5Q8NCS7 POU5F1P3-201ENST00000428824 1078 ntBASIC24.34■■□□□ 1.49
SLC44A5Q8NCS7 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SLC44A5Q8NCS7 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC24.34■■□□□ 1.49
SLC44A5Q8NCS7 INO80E-214ENST00000620599 515 ntTSL 2 BASIC24.34■■□□□ 1.49
SLC44A5Q8NCS7 AC066615.1-201ENST00000640911 628 ntBASIC24.34■■□□□ 1.49
SLC44A5Q8NCS7 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
SLC44A5Q8NCS7 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SLC44A5Q8NCS7 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
SLC44A5Q8NCS7 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SLC44A5Q8NCS7 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC24.33■■□□□ 1.49
SLC44A5Q8NCS7 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
SLC44A5Q8NCS7 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC24.33■■□□□ 1.49
SLC44A5Q8NCS7 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC24.33■■□□□ 1.49
SLC44A5Q8NCS7 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SLC44A5Q8NCS7 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
SLC44A5Q8NCS7 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC24.33■■□□□ 1.49
SLC44A5Q8NCS7 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC24.33■■□□□ 1.49
SLC44A5Q8NCS7 FAM201B-201ENST00000458407 597 ntBASIC24.33■■□□□ 1.49
SLC44A5Q8NCS7 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC24.33■■□□□ 1.49
SLC44A5Q8NCS7 AL589743.5-201ENST00000616611 1050 ntBASIC24.33■■□□□ 1.49
SLC44A5Q8NCS7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC24.33■■□□□ 1.49
SLC44A5Q8NCS7 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SLC44A5Q8NCS7 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC24.33■■□□□ 1.49
SLC44A5Q8NCS7 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SLC44A5Q8NCS7 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC24.33■■□□□ 1.49
SLC44A5Q8NCS7 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
SLC44A5Q8NCS7 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
SLC44A5Q8NCS7 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
SLC44A5Q8NCS7 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC24.33■■□□□ 1.48
SLC44A5Q8NCS7 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC24.33■■□□□ 1.48
SLC44A5Q8NCS7 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC24.33■■□□□ 1.48
SLC44A5Q8NCS7 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SLC44A5Q8NCS7 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC24.32■■□□□ 1.48
SLC44A5Q8NCS7 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SLC44A5Q8NCS7 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC24.32■■□□□ 1.48
SLC44A5Q8NCS7 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SLC44A5Q8NCS7 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC24.32■■□□□ 1.48
SLC44A5Q8NCS7 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC24.32■■□□□ 1.48
SLC44A5Q8NCS7 NME6-213ENST00000451657 871 ntTSL 2 BASIC24.32■■□□□ 1.48
SLC44A5Q8NCS7 GATS-209ENST00000454084 1030 ntTSL 3 BASIC24.32■■□□□ 1.48
SLC44A5Q8NCS7 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC24.32■■□□□ 1.48
SLC44A5Q8NCS7 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
SLC44A5Q8NCS7 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SLC44A5Q8NCS7 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SLC44A5Q8NCS7 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC24.32■■□□□ 1.48
SLC44A5Q8NCS7 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SLC44A5Q8NCS7 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
SLC44A5Q8NCS7 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC24.31■■□□□ 1.48
SLC44A5Q8NCS7 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SLC44A5Q8NCS7 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
SLC44A5Q8NCS7 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
SLC44A5Q8NCS7 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC24.31■■□□□ 1.48
SLC44A5Q8NCS7 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC24.31■■□□□ 1.48
SLC44A5Q8NCS7 LINC00565-201ENST00000562710 2331 ntBASIC24.31■■□□□ 1.48
SLC44A5Q8NCS7 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC24.31■■□□□ 1.48
SLC44A5Q8NCS7 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SLC44A5Q8NCS7 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SLC44A5Q8NCS7 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC24.31■■□□□ 1.48
SLC44A5Q8NCS7 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SLC44A5Q8NCS7 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SLC44A5Q8NCS7 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC24.3■■□□□ 1.48
SLC44A5Q8NCS7 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SLC44A5Q8NCS7 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SLC44A5Q8NCS7 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
SLC44A5Q8NCS7 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SLC44A5Q8NCS7 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
SLC44A5Q8NCS7 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC24.3■■□□□ 1.48
SLC44A5Q8NCS7 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SLC44A5Q8NCS7 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SLC44A5Q8NCS7 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SLC44A5Q8NCS7 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SLC44A5Q8NCS7 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
SLC44A5Q8NCS7 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC24.3■■□□□ 1.48
SLC44A5Q8NCS7 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC24.29■■□□□ 1.48
SLC44A5Q8NCS7 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SLC44A5Q8NCS7 PARN-205ENST00000539279 1557 ntTSL 2 BASIC24.29■■□□□ 1.48
SLC44A5Q8NCS7 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC24.29■■□□□ 1.48
SLC44A5Q8NCS7 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SLC44A5Q8NCS7 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SLC44A5Q8NCS7 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SLC44A5Q8NCS7 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC24.29■■□□□ 1.48
SLC44A5Q8NCS7 GAS7-202ENST00000396115 929 ntTSL 5 BASIC24.29■■□□□ 1.48
SLC44A5Q8NCS7 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
SLC44A5Q8NCS7 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC24.29■■□□□ 1.48
SLC44A5Q8NCS7 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC24.29■■□□□ 1.48
SLC44A5Q8NCS7 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC24.29■■□□□ 1.48
SLC44A5Q8NCS7 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
SLC44A5Q8NCS7 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SLC44A5Q8NCS7 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SLC44A5Q8NCS7 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC24.29■■□□□ 1.48
SLC44A5Q8NCS7 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms