Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC38A9Q8NBW4 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SLC38A9Q8NBW4 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.5■□□□□ 0.71
SLC38A9Q8NBW4 UNC93B5-201ENST00000530315 699 ntBASIC19.5■□□□□ 0.71
SLC38A9Q8NBW4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.5■□□□□ 0.71
SLC38A9Q8NBW4 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
SLC38A9Q8NBW4 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC38A9Q8NBW4 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
SLC38A9Q8NBW4 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC38A9Q8NBW4 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC38A9Q8NBW4 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC38A9Q8NBW4 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SLC38A9Q8NBW4 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC38A9Q8NBW4 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.49■□□□□ 0.71
SLC38A9Q8NBW4 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SLC38A9Q8NBW4 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC38A9Q8NBW4 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.49■□□□□ 0.71
SLC38A9Q8NBW4 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SLC38A9Q8NBW4 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.49■□□□□ 0.71
SLC38A9Q8NBW4 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SLC38A9Q8NBW4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC38A9Q8NBW4 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC38A9Q8NBW4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.49■□□□□ 0.71
SLC38A9Q8NBW4 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SLC38A9Q8NBW4 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
SLC38A9Q8NBW4 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SLC38A9Q8NBW4 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC38A9Q8NBW4 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.49■□□□□ 0.71
SLC38A9Q8NBW4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC38A9Q8NBW4 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC38A9Q8NBW4 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC38A9Q8NBW4 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC38A9Q8NBW4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.48■□□□□ 0.71
SLC38A9Q8NBW4 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SLC38A9Q8NBW4 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.48■□□□□ 0.71
SLC38A9Q8NBW4 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SLC38A9Q8NBW4 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.48■□□□□ 0.71
SLC38A9Q8NBW4 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SLC38A9Q8NBW4 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SLC38A9Q8NBW4 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC38A9Q8NBW4 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SLC38A9Q8NBW4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.48■□□□□ 0.71
SLC38A9Q8NBW4 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
SLC38A9Q8NBW4 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC38A9Q8NBW4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SLC38A9Q8NBW4 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC38A9Q8NBW4 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.48■□□□□ 0.71
SLC38A9Q8NBW4 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.48■□□□□ 0.71
SLC38A9Q8NBW4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC38A9Q8NBW4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC38A9Q8NBW4 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC38A9Q8NBW4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SLC38A9Q8NBW4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.47■□□□□ 0.71
SLC38A9Q8NBW4 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SLC38A9Q8NBW4 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC38A9Q8NBW4 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SLC38A9Q8NBW4 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SLC38A9Q8NBW4 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC38A9Q8NBW4 FBXW4P1-201ENST00000426721 2239 ntBASIC19.47■□□□□ 0.71
SLC38A9Q8NBW4 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC38A9Q8NBW4 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.47■□□□□ 0.71
SLC38A9Q8NBW4 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.47■□□□□ 0.71
SLC38A9Q8NBW4 AC006058.3-201ENST00000606217 1069 ntBASIC19.47■□□□□ 0.71
SLC38A9Q8NBW4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC38A9Q8NBW4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC38A9Q8NBW4 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.47■□□□□ 0.71
SLC38A9Q8NBW4 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SLC38A9Q8NBW4 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC38A9Q8NBW4 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
SLC38A9Q8NBW4 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SLC38A9Q8NBW4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLC38A9Q8NBW4 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.46■□□□□ 0.71
SLC38A9Q8NBW4 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.46■□□□□ 0.71
SLC38A9Q8NBW4 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLC38A9Q8NBW4 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC38A9Q8NBW4 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.46■□□□□ 0.71
SLC38A9Q8NBW4 AC098590.1-201ENST00000468126 897 ntBASIC19.46■□□□□ 0.71
SLC38A9Q8NBW4 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.46■□□□□ 0.71
SLC38A9Q8NBW4 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC38A9Q8NBW4 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLC38A9Q8NBW4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLC38A9Q8NBW4 AC079834.2-201ENST00000609776 1949 ntBASIC19.46■□□□□ 0.71
SLC38A9Q8NBW4 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.46■□□□□ 0.71
SLC38A9Q8NBW4 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC38A9Q8NBW4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC38A9Q8NBW4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.46■□□□□ 0.71
SLC38A9Q8NBW4 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLC38A9Q8NBW4 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC38A9Q8NBW4 AC244015.2-201ENST00000616358 1861 ntBASIC19.45■□□□□ 0.7
SLC38A9Q8NBW4 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SLC38A9Q8NBW4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
SLC38A9Q8NBW4 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.45■□□□□ 0.7
SLC38A9Q8NBW4 AC026366.1-201ENST00000488803 879 ntBASIC19.45■□□□□ 0.7
SLC38A9Q8NBW4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SLC38A9Q8NBW4 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.45■□□□□ 0.7
SLC38A9Q8NBW4 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.45■□□□□ 0.7
SLC38A9Q8NBW4 HLA-B-256ENST00000639848 1089 ntBASIC19.45■□□□□ 0.7
SLC38A9Q8NBW4 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC38A9Q8NBW4 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC38A9Q8NBW4 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms