Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LINC01555Q8NAE3 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
LINC01555Q8NAE3 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.9■□□□□ 0.78
LINC01555Q8NAE3 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
LINC01555Q8NAE3 TSPY6P-201ENST00000448518 926 ntBASIC19.9■□□□□ 0.78
LINC01555Q8NAE3 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.9■□□□□ 0.78
LINC01555Q8NAE3 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
LINC01555Q8NAE3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
LINC01555Q8NAE3 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LINC01555Q8NAE3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
LINC01555Q8NAE3 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LINC01555Q8NAE3 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LINC01555Q8NAE3 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LINC01555Q8NAE3 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.89■□□□□ 0.77
LINC01555Q8NAE3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
LINC01555Q8NAE3 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LINC01555Q8NAE3 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.89■□□□□ 0.77
LINC01555Q8NAE3 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LINC01555Q8NAE3 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.89■□□□□ 0.77
LINC01555Q8NAE3 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LINC01555Q8NAE3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.89■□□□□ 0.77
LINC01555Q8NAE3 AC010980.2-201ENST00000587099 1412 ntBASIC19.89■□□□□ 0.77
LINC01555Q8NAE3 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.89■□□□□ 0.77
LINC01555Q8NAE3 AL109923.1-201ENST00000618799 583 ntBASIC19.89■□□□□ 0.77
LINC01555Q8NAE3 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LINC01555Q8NAE3 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.88■□□□□ 0.77
LINC01555Q8NAE3 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
LINC01555Q8NAE3 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LINC01555Q8NAE3 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.88■□□□□ 0.77
LINC01555Q8NAE3 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LINC01555Q8NAE3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LINC01555Q8NAE3 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LINC01555Q8NAE3 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.88■□□□□ 0.77
LINC01555Q8NAE3 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.88■□□□□ 0.77
LINC01555Q8NAE3 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
LINC01555Q8NAE3 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.88■□□□□ 0.77
LINC01555Q8NAE3 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
LINC01555Q8NAE3 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.88■□□□□ 0.77
LINC01555Q8NAE3 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.88■□□□□ 0.77
LINC01555Q8NAE3 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LINC01555Q8NAE3 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LINC01555Q8NAE3 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LINC01555Q8NAE3 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LINC01555Q8NAE3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.88■□□□□ 0.77
LINC01555Q8NAE3 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
LINC01555Q8NAE3 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LINC01555Q8NAE3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LINC01555Q8NAE3 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.87■□□□□ 0.77
LINC01555Q8NAE3 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LINC01555Q8NAE3 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
LINC01555Q8NAE3 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.87■□□□□ 0.77
LINC01555Q8NAE3 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
LINC01555Q8NAE3 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.87■□□□□ 0.77
LINC01555Q8NAE3 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LINC01555Q8NAE3 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.87■□□□□ 0.77
LINC01555Q8NAE3 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
LINC01555Q8NAE3 MKRN4P-201ENST00000444706 1521 ntBASIC19.86■□□□□ 0.77
LINC01555Q8NAE3 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
LINC01555Q8NAE3 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
LINC01555Q8NAE3 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LINC01555Q8NAE3 CYP21A1P-202ENST00000354927 1481 ntBASIC19.86■□□□□ 0.77
LINC01555Q8NAE3 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.86■□□□□ 0.77
LINC01555Q8NAE3 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
LINC01555Q8NAE3 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LINC01555Q8NAE3 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.86■□□□□ 0.77
LINC01555Q8NAE3 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
LINC01555Q8NAE3 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.86■□□□□ 0.77
LINC01555Q8NAE3 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LINC01555Q8NAE3 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.86■□□□□ 0.77
LINC01555Q8NAE3 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.86■□□□□ 0.77
LINC01555Q8NAE3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.86■□□□□ 0.77
LINC01555Q8NAE3 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
LINC01555Q8NAE3 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
LINC01555Q8NAE3 AC100791.3-201ENST00000617619 330 ntBASIC19.86■□□□□ 0.77
LINC01555Q8NAE3 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.86■□□□□ 0.77
LINC01555Q8NAE3 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LINC01555Q8NAE3 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.86■□□□□ 0.77
LINC01555Q8NAE3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
LINC01555Q8NAE3 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LINC01555Q8NAE3 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
LINC01555Q8NAE3 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LINC01555Q8NAE3 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
LINC01555Q8NAE3 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LINC01555Q8NAE3 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.85■□□□□ 0.77
LINC01555Q8NAE3 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LINC01555Q8NAE3 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.85■□□□□ 0.77
LINC01555Q8NAE3 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.85■□□□□ 0.77
LINC01555Q8NAE3 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.85■□□□□ 0.77
LINC01555Q8NAE3 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LINC01555Q8NAE3 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LINC01555Q8NAE3 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
LINC01555Q8NAE3 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LINC01555Q8NAE3 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.85■□□□□ 0.77
LINC01555Q8NAE3 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
LINC01555Q8NAE3 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
LINC01555Q8NAE3 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LINC01555Q8NAE3 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
LINC01555Q8NAE3 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LINC01555Q8NAE3 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
LINC01555Q8NAE3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms