Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC71LQ8N9Z2 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC71LQ8N9Z2 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC71LQ8N9Z2 AC136469.2-201ENST00000623944 1028 ntBASIC17.13■□□□□ 0.33
CCDC71LQ8N9Z2 AFG3L1P-217ENST00000557444 2447 ntBASIC17.13■□□□□ 0.33
CCDC71LQ8N9Z2 SYT6-210ENST00000641643 1587 ntBASIC17.13■□□□□ 0.33
CCDC71LQ8N9Z2 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC71LQ8N9Z2 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC71LQ8N9Z2 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC71LQ8N9Z2 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC71LQ8N9Z2 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.13■□□□□ 0.33
CCDC71LQ8N9Z2 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC71LQ8N9Z2 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CCDC71LQ8N9Z2 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC71LQ8N9Z2 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.13■□□□□ 0.33
CCDC71LQ8N9Z2 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCDC71LQ8N9Z2 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CCDC71LQ8N9Z2 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC71LQ8N9Z2 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC71LQ8N9Z2 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC71LQ8N9Z2 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC71LQ8N9Z2 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC71LQ8N9Z2 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC71LQ8N9Z2 SLC47A1P1-202ENST00000449666 945 ntBASIC17.12■□□□□ 0.33
CCDC71LQ8N9Z2 RARRES2P1-201ENST00000474487 481 ntBASIC17.12■□□□□ 0.33
CCDC71LQ8N9Z2 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC71LQ8N9Z2 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC71LQ8N9Z2 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC71LQ8N9Z2 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC71LQ8N9Z2 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.12■□□□□ 0.33
CCDC71LQ8N9Z2 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC71LQ8N9Z2 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC71LQ8N9Z2 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC71LQ8N9Z2 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CCDC71LQ8N9Z2 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CCDC71LQ8N9Z2 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC71LQ8N9Z2 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC71LQ8N9Z2 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC71LQ8N9Z2 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC71LQ8N9Z2 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC71LQ8N9Z2 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC71LQ8N9Z2 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCDC71LQ8N9Z2 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC17.12■□□□□ 0.33
CCDC71LQ8N9Z2 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC71LQ8N9Z2 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC71LQ8N9Z2 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC71LQ8N9Z2 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC71LQ8N9Z2 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC71LQ8N9Z2 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC71LQ8N9Z2 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
CCDC71LQ8N9Z2 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC71LQ8N9Z2 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC71LQ8N9Z2 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CCDC71LQ8N9Z2 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.11■□□□□ 0.33
CCDC71LQ8N9Z2 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CCDC71LQ8N9Z2 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.11■□□□□ 0.33
CCDC71LQ8N9Z2 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC71LQ8N9Z2 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC71LQ8N9Z2 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC71LQ8N9Z2 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC71LQ8N9Z2 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CCDC71LQ8N9Z2 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC71LQ8N9Z2 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC71LQ8N9Z2 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC71LQ8N9Z2 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC71LQ8N9Z2 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.11■□□□□ 0.33
CCDC71LQ8N9Z2 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC71LQ8N9Z2 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC71LQ8N9Z2 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC71LQ8N9Z2 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC71LQ8N9Z2 AL162377.1-201ENST00000618844 1793 ntBASIC17.1■□□□□ 0.33
CCDC71LQ8N9Z2 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CCDC71LQ8N9Z2 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC71LQ8N9Z2 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CCDC71LQ8N9Z2 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CCDC71LQ8N9Z2 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC71LQ8N9Z2 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC71LQ8N9Z2 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC71LQ8N9Z2 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC71LQ8N9Z2 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.1■□□□□ 0.33
CCDC71LQ8N9Z2 AC011298.3-201ENST00000615796 283 ntBASIC17.1■□□□□ 0.33
CCDC71LQ8N9Z2 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC17.1■□□□□ 0.33
CCDC71LQ8N9Z2 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC71LQ8N9Z2 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
CCDC71LQ8N9Z2 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC71LQ8N9Z2 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC71LQ8N9Z2 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CCDC71LQ8N9Z2 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC71LQ8N9Z2 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CCDC71LQ8N9Z2 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC71LQ8N9Z2 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.1■□□□□ 0.33
CCDC71LQ8N9Z2 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CCDC71LQ8N9Z2 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CCDC71LQ8N9Z2 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC71LQ8N9Z2 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC71LQ8N9Z2 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC71LQ8N9Z2 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
CCDC71LQ8N9Z2 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC71LQ8N9Z2 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC71LQ8N9Z2 SERBP1P1-201ENST00000396021 1160 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms