Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
PAF1Q8N7H5 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.14■□□□□ 0.98
PAF1Q8N7H5 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PAF1Q8N7H5 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.14■□□□□ 0.97
PAF1Q8N7H5 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
PAF1Q8N7H5 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.14■□□□□ 0.97
PAF1Q8N7H5 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
PAF1Q8N7H5 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.14■□□□□ 0.97
PAF1Q8N7H5 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.14■□□□□ 0.97
PAF1Q8N7H5 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PAF1Q8N7H5 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.14■□□□□ 0.97
PAF1Q8N7H5 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.14■□□□□ 0.97
PAF1Q8N7H5 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PAF1Q8N7H5 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.14■□□□□ 0.97
PAF1Q8N7H5 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
PAF1Q8N7H5 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PAF1Q8N7H5 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PAF1Q8N7H5 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
PAF1Q8N7H5 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PAF1Q8N7H5 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.13■□□□□ 0.97
PAF1Q8N7H5 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC21.13■□□□□ 0.97
PAF1Q8N7H5 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PAF1Q8N7H5 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.13■□□□□ 0.97
PAF1Q8N7H5 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.13■□□□□ 0.97
PAF1Q8N7H5 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.13■□□□□ 0.97
PAF1Q8N7H5 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PAF1Q8N7H5 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PAF1Q8N7H5 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC21.13■□□□□ 0.97
PAF1Q8N7H5 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PAF1Q8N7H5 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.13■□□□□ 0.97
PAF1Q8N7H5 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PAF1Q8N7H5 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PAF1Q8N7H5 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PAF1Q8N7H5 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
PAF1Q8N7H5 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
PAF1Q8N7H5 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PAF1Q8N7H5 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PAF1Q8N7H5 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PAF1Q8N7H5 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.13■□□□□ 0.97
PAF1Q8N7H5 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PAF1Q8N7H5 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.13■□□□□ 0.97
PAF1Q8N7H5 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PAF1Q8N7H5 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PAF1Q8N7H5 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PAF1Q8N7H5 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.12■□□□□ 0.97
PAF1Q8N7H5 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
PAF1Q8N7H5 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
PAF1Q8N7H5 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PAF1Q8N7H5 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.12■□□□□ 0.97
PAF1Q8N7H5 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
PAF1Q8N7H5 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PAF1Q8N7H5 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PAF1Q8N7H5 AC245052.3-201ENST00000450182 901 ntBASIC21.12■□□□□ 0.97
PAF1Q8N7H5 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.12■□□□□ 0.97
PAF1Q8N7H5 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.12■□□□□ 0.97
PAF1Q8N7H5 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PAF1Q8N7H5 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PAF1Q8N7H5 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PAF1Q8N7H5 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PAF1Q8N7H5 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
PAF1Q8N7H5 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PAF1Q8N7H5 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PAF1Q8N7H5 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.11■□□□□ 0.97
PAF1Q8N7H5 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
PAF1Q8N7H5 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.11■□□□□ 0.97
PAF1Q8N7H5 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.11■□□□□ 0.97
PAF1Q8N7H5 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.11■□□□□ 0.97
PAF1Q8N7H5 MFSD11-216ENST00000590393 1141 ntBASIC21.11■□□□□ 0.97
PAF1Q8N7H5 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.11■□□□□ 0.97
PAF1Q8N7H5 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.11■□□□□ 0.97
PAF1Q8N7H5 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
PAF1Q8N7H5 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PAF1Q8N7H5 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PAF1Q8N7H5 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PAF1Q8N7H5 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PAF1Q8N7H5 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PAF1Q8N7H5 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PAF1Q8N7H5 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PAF1Q8N7H5 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PAF1Q8N7H5 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.1■□□□□ 0.97
PAF1Q8N7H5 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PAF1Q8N7H5 Z98882.1-201ENST00000622160 2253 ntBASIC21.1■□□□□ 0.97
PAF1Q8N7H5 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PAF1Q8N7H5 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
PAF1Q8N7H5 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
PAF1Q8N7H5 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.1■□□□□ 0.97
PAF1Q8N7H5 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.1■□□□□ 0.97
PAF1Q8N7H5 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.1■□□□□ 0.97
PAF1Q8N7H5 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.1■□□□□ 0.97
PAF1Q8N7H5 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PAF1Q8N7H5 AC010536.3-201ENST00000620306 533 ntBASIC21.1■□□□□ 0.97
PAF1Q8N7H5 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.1■□□□□ 0.97
PAF1Q8N7H5 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PAF1Q8N7H5 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.1■□□□□ 0.97
PAF1Q8N7H5 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.1■□□□□ 0.97
PAF1Q8N7H5 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PAF1Q8N7H5 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PAF1Q8N7H5 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.09■□□□□ 0.97
PAF1Q8N7H5 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PAF1Q8N7H5 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms