Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC28.84■■■□□ 2.21
ARHGEF28Q8N1W1 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC28.83■■■□□ 2.21
ARHGEF28Q8N1W1 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC28.83■■■□□ 2.21
ARHGEF28Q8N1W1 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
ARHGEF28Q8N1W1 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC28.83■■■□□ 2.21
ARHGEF28Q8N1W1 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC28.83■■■□□ 2.21
ARHGEF28Q8N1W1 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC28.83■■■□□ 2.21
ARHGEF28Q8N1W1 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC28.83■■■□□ 2.21
ARHGEF28Q8N1W1 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC28.83■■■□□ 2.21
ARHGEF28Q8N1W1 OR2A1-AS1-207ENST00000486094 819 ntBASIC28.83■■■□□ 2.21
ARHGEF28Q8N1W1 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
ARHGEF28Q8N1W1 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC28.83■■■□□ 2.21
ARHGEF28Q8N1W1 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC28.83■■■□□ 2.21
ARHGEF28Q8N1W1 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC28.83■■■□□ 2.21
ARHGEF28Q8N1W1 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
ARHGEF28Q8N1W1 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
ARHGEF28Q8N1W1 POM121L13P-201ENST00000422362 380 ntBASIC28.83■■■□□ 2.21
ARHGEF28Q8N1W1 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
ARHGEF28Q8N1W1 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
ARHGEF28Q8N1W1 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC28.82■■■□□ 2.2
ARHGEF28Q8N1W1 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
ARHGEF28Q8N1W1 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC28.82■■■□□ 2.2
ARHGEF28Q8N1W1 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC28.82■■■□□ 2.2
ARHGEF28Q8N1W1 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
ARHGEF28Q8N1W1 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
ARHGEF28Q8N1W1 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
ARHGEF28Q8N1W1 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC28.82■■■□□ 2.2
ARHGEF28Q8N1W1 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC28.81■■■□□ 2.2
ARHGEF28Q8N1W1 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC28.81■■■□□ 2.2
ARHGEF28Q8N1W1 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC28.81■■■□□ 2.2
ARHGEF28Q8N1W1 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
ARHGEF28Q8N1W1 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
ARHGEF28Q8N1W1 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC28.81■■■□□ 2.2
ARHGEF28Q8N1W1 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC28.81■■■□□ 2.2
ARHGEF28Q8N1W1 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC28.81■■■□□ 2.2
ARHGEF28Q8N1W1 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
ARHGEF28Q8N1W1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC28.8■■■□□ 2.2
ARHGEF28Q8N1W1 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
ARHGEF28Q8N1W1 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
ARHGEF28Q8N1W1 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC28.8■■■□□ 2.2
ARHGEF28Q8N1W1 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
ARHGEF28Q8N1W1 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC28.8■■■□□ 2.2
ARHGEF28Q8N1W1 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
ARHGEF28Q8N1W1 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC28.8■■■□□ 2.2
ARHGEF28Q8N1W1 MFF-205ENST00000354503 1085 ntTSL 2 BASIC28.8■■■□□ 2.2
ARHGEF28Q8N1W1 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC28.8■■■□□ 2.2
ARHGEF28Q8N1W1 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC28.8■■■□□ 2.2
ARHGEF28Q8N1W1 SERP1-205ENST00000487153 657 ntTSL 4 BASIC28.8■■■□□ 2.2
ARHGEF28Q8N1W1 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
ARHGEF28Q8N1W1 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
ARHGEF28Q8N1W1 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC28.79■■■□□ 2.2
ARHGEF28Q8N1W1 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
ARHGEF28Q8N1W1 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC28.79■■■□□ 2.2
ARHGEF28Q8N1W1 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC28.79■■■□□ 2.2
ARHGEF28Q8N1W1 C1QBPP2-201ENST00000528754 825 ntBASIC28.79■■■□□ 2.2
ARHGEF28Q8N1W1 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
ARHGEF28Q8N1W1 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC28.79■■■□□ 2.2
ARHGEF28Q8N1W1 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC28.78■■■□□ 2.2
ARHGEF28Q8N1W1 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC28.78■■■□□ 2.2
ARHGEF28Q8N1W1 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
ARHGEF28Q8N1W1 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC28.78■■■□□ 2.2
ARHGEF28Q8N1W1 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
ARHGEF28Q8N1W1 AL596275.1-201ENST00000423464 877 ntBASIC28.78■■■□□ 2.2
ARHGEF28Q8N1W1 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC28.78■■■□□ 2.2
ARHGEF28Q8N1W1 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC28.78■■■□□ 2.2
ARHGEF28Q8N1W1 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC28.78■■■□□ 2.2
ARHGEF28Q8N1W1 TUB-203ENST00000534099 1759 ntTSL 2 BASIC28.78■■■□□ 2.2
ARHGEF28Q8N1W1 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
ARHGEF28Q8N1W1 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC28.78■■■□□ 2.2
ARHGEF28Q8N1W1 MOK-233ENST00000524214 1539 ntTSL 2 BASIC28.78■■■□□ 2.2
ARHGEF28Q8N1W1 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC28.78■■■□□ 2.2
ARHGEF28Q8N1W1 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC28.78■■■□□ 2.2
ARHGEF28Q8N1W1 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
ARHGEF28Q8N1W1 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
ARHGEF28Q8N1W1 PEX7-202ENST00000367756 680 ntTSL 3 BASIC28.77■■■□□ 2.2
ARHGEF28Q8N1W1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC28.77■■■□□ 2.2
ARHGEF28Q8N1W1 PGM5P4-201ENST00000421970 445 ntBASIC28.77■■■□□ 2.2
ARHGEF28Q8N1W1 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC28.77■■■□□ 2.2
ARHGEF28Q8N1W1 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
ARHGEF28Q8N1W1 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC28.77■■■□□ 2.2
ARHGEF28Q8N1W1 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC28.77■■■□□ 2.2
ARHGEF28Q8N1W1 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
ARHGEF28Q8N1W1 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
ARHGEF28Q8N1W1 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC28.77■■■□□ 2.2
ARHGEF28Q8N1W1 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
ARHGEF28Q8N1W1 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
ARHGEF28Q8N1W1 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
ARHGEF28Q8N1W1 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC28.77■■■□□ 2.2
ARHGEF28Q8N1W1 REXO2-208ENST00000539754 791 ntTSL 2 BASIC28.77■■■□□ 2.2
ARHGEF28Q8N1W1 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC28.77■■■□□ 2.2
ARHGEF28Q8N1W1 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC28.77■■■□□ 2.2
ARHGEF28Q8N1W1 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
ARHGEF28Q8N1W1 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
ARHGEF28Q8N1W1 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC28.77■■■□□ 2.2
ARHGEF28Q8N1W1 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
ARHGEF28Q8N1W1 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
ARHGEF28Q8N1W1 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.2
ARHGEF28Q8N1W1 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.2
ARHGEF28Q8N1W1 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC28.76■■■□□ 2.19
ARHGEF28Q8N1W1 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms