Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.78■■□□□ 1.08
SCN4BQ8IWT1 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SCN4BQ8IWT1 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SCN4BQ8IWT1 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SCN4BQ8IWT1 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SCN4BQ8IWT1 DUSP5P2-201ENST00000426873 1033 ntBASIC21.78■■□□□ 1.08
SCN4BQ8IWT1 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.78■■□□□ 1.08
SCN4BQ8IWT1 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.78■■□□□ 1.08
SCN4BQ8IWT1 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.78■■□□□ 1.08
SCN4BQ8IWT1 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.78■■□□□ 1.08
SCN4BQ8IWT1 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
SCN4BQ8IWT1 CYP2T3P-201ENST00000601990 817 ntBASIC21.78■■□□□ 1.08
SCN4BQ8IWT1 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SCN4BQ8IWT1 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SCN4BQ8IWT1 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SCN4BQ8IWT1 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SCN4BQ8IWT1 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SCN4BQ8IWT1 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SCN4BQ8IWT1 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCN4BQ8IWT1 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCN4BQ8IWT1 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCN4BQ8IWT1 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SCN4BQ8IWT1 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
SCN4BQ8IWT1 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
SCN4BQ8IWT1 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.77■■□□□ 1.08
SCN4BQ8IWT1 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCN4BQ8IWT1 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCN4BQ8IWT1 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SCN4BQ8IWT1 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
SCN4BQ8IWT1 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCN4BQ8IWT1 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCN4BQ8IWT1 MCRIP2P1-201ENST00000394346 511 ntBASIC21.77■■□□□ 1.08
SCN4BQ8IWT1 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCN4BQ8IWT1 AC097658.1-201ENST00000475555 843 ntBASIC21.77■■□□□ 1.08
SCN4BQ8IWT1 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.77■■□□□ 1.08
SCN4BQ8IWT1 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCN4BQ8IWT1 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.77■■□□□ 1.08
SCN4BQ8IWT1 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.77■■□□□ 1.08
SCN4BQ8IWT1 AC100791.3-201ENST00000617619 330 ntBASIC21.77■■□□□ 1.08
SCN4BQ8IWT1 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCN4BQ8IWT1 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCN4BQ8IWT1 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.76■■□□□ 1.07
SCN4BQ8IWT1 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SCN4BQ8IWT1 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SCN4BQ8IWT1 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.76■■□□□ 1.07
SCN4BQ8IWT1 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.76■■□□□ 1.07
SCN4BQ8IWT1 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.76■■□□□ 1.07
SCN4BQ8IWT1 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.76■■□□□ 1.07
SCN4BQ8IWT1 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.76■■□□□ 1.07
SCN4BQ8IWT1 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
SCN4BQ8IWT1 AC091874.3-201ENST00000512672 1195 ntBASIC21.76■■□□□ 1.07
SCN4BQ8IWT1 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SCN4BQ8IWT1 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.76■■□□□ 1.07
SCN4BQ8IWT1 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
SCN4BQ8IWT1 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
SCN4BQ8IWT1 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SCN4BQ8IWT1 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
SCN4BQ8IWT1 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SCN4BQ8IWT1 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SCN4BQ8IWT1 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SCN4BQ8IWT1 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
SCN4BQ8IWT1 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
SCN4BQ8IWT1 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.75■■□□□ 1.07
SCN4BQ8IWT1 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SCN4BQ8IWT1 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
SCN4BQ8IWT1 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SCN4BQ8IWT1 RNA5SP413-201ENST00000516373 109 ntBASIC21.75■■□□□ 1.07
SCN4BQ8IWT1 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.75■■□□□ 1.07
SCN4BQ8IWT1 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.75■■□□□ 1.07
SCN4BQ8IWT1 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SCN4BQ8IWT1 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
SCN4BQ8IWT1 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SCN4BQ8IWT1 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SCN4BQ8IWT1 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SCN4BQ8IWT1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.75■■□□□ 1.07
SCN4BQ8IWT1 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.75■■□□□ 1.07
SCN4BQ8IWT1 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SCN4BQ8IWT1 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SCN4BQ8IWT1 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SCN4BQ8IWT1 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
SCN4BQ8IWT1 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
SCN4BQ8IWT1 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
SCN4BQ8IWT1 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SCN4BQ8IWT1 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
SCN4BQ8IWT1 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SCN4BQ8IWT1 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SCN4BQ8IWT1 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.74■■□□□ 1.07
SCN4BQ8IWT1 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.74■■□□□ 1.07
SCN4BQ8IWT1 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SCN4BQ8IWT1 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.74■■□□□ 1.07
SCN4BQ8IWT1 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.74■■□□□ 1.07
SCN4BQ8IWT1 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.74■■□□□ 1.07
SCN4BQ8IWT1 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.74■■□□□ 1.07
SCN4BQ8IWT1 AC083880.1-201ENST00000608266 535 ntBASIC21.74■■□□□ 1.07
SCN4BQ8IWT1 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.74■■□□□ 1.07
SCN4BQ8IWT1 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.74■■□□□ 1.07
SCN4BQ8IWT1 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
SCN4BQ8IWT1 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.74■■□□□ 1.07
SCN4BQ8IWT1 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.74■■□□□ 1.07
SCN4BQ8IWT1 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms