Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PACS2Q86VP3 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
PACS2Q86VP3 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
PACS2Q86VP3 NOC2LP1-202ENST00000452600 2235 ntBASIC20.65■□□□□ 0.9
PACS2Q86VP3 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.65■□□□□ 0.9
PACS2Q86VP3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.64■□□□□ 0.9
PACS2Q86VP3 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PACS2Q86VP3 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
PACS2Q86VP3 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
PACS2Q86VP3 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PACS2Q86VP3 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
PACS2Q86VP3 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PACS2Q86VP3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PACS2Q86VP3 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
PACS2Q86VP3 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
PACS2Q86VP3 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.64■□□□□ 0.89
PACS2Q86VP3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.64■□□□□ 0.89
PACS2Q86VP3 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PACS2Q86VP3 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.64■□□□□ 0.89
PACS2Q86VP3 AC092171.4-201ENST00000609130 632 ntBASIC20.64■□□□□ 0.89
PACS2Q86VP3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.64■□□□□ 0.89
PACS2Q86VP3 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PACS2Q86VP3 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PACS2Q86VP3 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
PACS2Q86VP3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PACS2Q86VP3 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PACS2Q86VP3 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.63■□□□□ 0.89
PACS2Q86VP3 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PACS2Q86VP3 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PACS2Q86VP3 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PACS2Q86VP3 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PACS2Q86VP3 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PACS2Q86VP3 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.63■□□□□ 0.89
PACS2Q86VP3 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PACS2Q86VP3 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PACS2Q86VP3 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
PACS2Q86VP3 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
PACS2Q86VP3 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PACS2Q86VP3 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.62■□□□□ 0.89
PACS2Q86VP3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
PACS2Q86VP3 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PACS2Q86VP3 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.62■□□□□ 0.89
PACS2Q86VP3 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
PACS2Q86VP3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PACS2Q86VP3 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PACS2Q86VP3 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.61■□□□□ 0.89
PACS2Q86VP3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.61■□□□□ 0.89
PACS2Q86VP3 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PACS2Q86VP3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PACS2Q86VP3 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.61■□□□□ 0.89
PACS2Q86VP3 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PACS2Q86VP3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PACS2Q86VP3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.61■□□□□ 0.89
PACS2Q86VP3 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.61■□□□□ 0.89
PACS2Q86VP3 C17orf82-201ENST00000623772 1530 ntBASIC20.61■□□□□ 0.89
PACS2Q86VP3 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PACS2Q86VP3 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PACS2Q86VP3 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.61■□□□□ 0.89
PACS2Q86VP3 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.61■□□□□ 0.89
PACS2Q86VP3 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PACS2Q86VP3 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.61■□□□□ 0.89
PACS2Q86VP3 AC093503.3-201ENST00000624917 2352 ntBASIC20.6■□□□□ 0.89
PACS2Q86VP3 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.6■□□□□ 0.89
PACS2Q86VP3 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PACS2Q86VP3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.6■□□□□ 0.89
PACS2Q86VP3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PACS2Q86VP3 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PACS2Q86VP3 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.6■□□□□ 0.89
PACS2Q86VP3 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC20.6■□□□□ 0.89
PACS2Q86VP3 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PACS2Q86VP3 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.6■□□□□ 0.89
PACS2Q86VP3 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.6■□□□□ 0.89
PACS2Q86VP3 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PACS2Q86VP3 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PACS2Q86VP3 DUX4L19-201ENST00000557448 1267 ntBASIC20.6■□□□□ 0.89
PACS2Q86VP3 AC241377.3-202ENST00000626088 1088 ntBASIC20.6■□□□□ 0.89
PACS2Q86VP3 AC241585.3-202ENST00000628937 1088 ntBASIC20.6■□□□□ 0.89
PACS2Q86VP3 AC245100.8-202ENST00000629247 1058 ntBASIC20.6■□□□□ 0.89
PACS2Q86VP3 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.6■□□□□ 0.89
PACS2Q86VP3 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
PACS2Q86VP3 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
PACS2Q86VP3 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PACS2Q86VP3 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PACS2Q86VP3 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PACS2Q86VP3 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.6■□□□□ 0.89
PACS2Q86VP3 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.6■□□□□ 0.89
PACS2Q86VP3 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PACS2Q86VP3 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PACS2Q86VP3 AL049796.1-201ENST00000565336 1766 ntBASIC20.59■□□□□ 0.89
PACS2Q86VP3 AL032819.2-201ENST00000624543 2162 ntBASIC20.59■□□□□ 0.89
PACS2Q86VP3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PACS2Q86VP3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PACS2Q86VP3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PACS2Q86VP3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PACS2Q86VP3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.59■□□□□ 0.89
PACS2Q86VP3 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
PACS2Q86VP3 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
PACS2Q86VP3 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PACS2Q86VP3 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PACS2Q86VP3 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms