Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
LRRTM4Q86VH4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.27■□□□□ 0.83
LRRTM4Q86VH4 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRTM4Q86VH4 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LRRTM4Q86VH4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRTM4Q86VH4 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
LRRTM4Q86VH4 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.26■□□□□ 0.83
LRRTM4Q86VH4 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LRRTM4Q86VH4 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRTM4Q86VH4 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.26■□□□□ 0.83
LRRTM4Q86VH4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
LRRTM4Q86VH4 MIPEPP3-201ENST00000412105 444 ntBASIC20.26■□□□□ 0.83
LRRTM4Q86VH4 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.26■□□□□ 0.83
LRRTM4Q86VH4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.26■□□□□ 0.83
LRRTM4Q86VH4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.26■□□□□ 0.83
LRRTM4Q86VH4 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.26■□□□□ 0.83
LRRTM4Q86VH4 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.26■□□□□ 0.83
LRRTM4Q86VH4 AC142086.2-201ENST00000569753 217 ntBASIC20.26■□□□□ 0.83
LRRTM4Q86VH4 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.26■□□□□ 0.83
LRRTM4Q86VH4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
LRRTM4Q86VH4 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRTM4Q86VH4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRTM4Q86VH4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.26■□□□□ 0.83
LRRTM4Q86VH4 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRTM4Q86VH4 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
LRRTM4Q86VH4 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.26■□□□□ 0.83
LRRTM4Q86VH4 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRTM4Q86VH4 AC026310.3-201ENST00000625186 2373 ntBASIC20.26■□□□□ 0.83
LRRTM4Q86VH4 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
LRRTM4Q86VH4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRRTM4Q86VH4 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRTM4Q86VH4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRRTM4Q86VH4 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRTM4Q86VH4 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRTM4Q86VH4 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
LRRTM4Q86VH4 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.25■□□□□ 0.83
LRRTM4Q86VH4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRTM4Q86VH4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRRTM4Q86VH4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
LRRTM4Q86VH4 BX276092.2-201ENST00000417668 665 ntBASIC20.25■□□□□ 0.83
LRRTM4Q86VH4 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRRTM4Q86VH4 AL138781.1-201ENST00000566567 1274 ntBASIC20.25■□□□□ 0.83
LRRTM4Q86VH4 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.25■□□□□ 0.83
LRRTM4Q86VH4 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
LRRTM4Q86VH4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.25■□□□□ 0.83
LRRTM4Q86VH4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRTM4Q86VH4 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRTM4Q86VH4 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRTM4Q86VH4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
LRRTM4Q86VH4 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
LRRTM4Q86VH4 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRTM4Q86VH4 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.25■□□□□ 0.83
LRRTM4Q86VH4 AC011484.1-201ENST00000377652 1995 ntBASIC20.25■□□□□ 0.83
LRRTM4Q86VH4 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
LRRTM4Q86VH4 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRTM4Q86VH4 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRTM4Q86VH4 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRTM4Q86VH4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
LRRTM4Q86VH4 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LRRTM4Q86VH4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRTM4Q86VH4 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.24■□□□□ 0.83
LRRTM4Q86VH4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.24■□□□□ 0.83
LRRTM4Q86VH4 MCRIP2P1-201ENST00000394346 511 ntBASIC20.24■□□□□ 0.83
LRRTM4Q86VH4 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
LRRTM4Q86VH4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.24■□□□□ 0.83
LRRTM4Q86VH4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.24■□□□□ 0.83
LRRTM4Q86VH4 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.24■□□□□ 0.83
LRRTM4Q86VH4 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.24■□□□□ 0.83
LRRTM4Q86VH4 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.24■□□□□ 0.83
LRRTM4Q86VH4 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.24■□□□□ 0.83
LRRTM4Q86VH4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRTM4Q86VH4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRTM4Q86VH4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.24■□□□□ 0.83
LRRTM4Q86VH4 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRTM4Q86VH4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRTM4Q86VH4 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRTM4Q86VH4 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRTM4Q86VH4 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRTM4Q86VH4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.23■□□□□ 0.83
LRRTM4Q86VH4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRTM4Q86VH4 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRTM4Q86VH4 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRTM4Q86VH4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRTM4Q86VH4 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
LRRTM4Q86VH4 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LRRTM4Q86VH4 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.23■□□□□ 0.83
LRRTM4Q86VH4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.23■□□□□ 0.83
LRRTM4Q86VH4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.23■□□□□ 0.83
LRRTM4Q86VH4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.23■□□□□ 0.83
LRRTM4Q86VH4 MIR4758-201ENST00000577688 71 ntBASIC20.23■□□□□ 0.83
LRRTM4Q86VH4 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.23■□□□□ 0.83
LRRTM4Q86VH4 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRTM4Q86VH4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRTM4Q86VH4 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRTM4Q86VH4 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.23■□□□□ 0.83
LRRTM4Q86VH4 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRTM4Q86VH4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.22■□□□□ 0.83
LRRTM4Q86VH4 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LRRTM4Q86VH4 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.22■□□□□ 0.83
LRRTM4Q86VH4 AF106564.1-201ENST00000607058 2553 ntBASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms