Protein–RNA interactions for Protein: Q86UF4

CCDC190, Coiled-coil domain-containing protein 190, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC190Q86UF4 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC190Q86UF4 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC190Q86UF4 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC190Q86UF4 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CCDC190Q86UF4 IDNK-201ENST00000376417 511 ntTSL 5 BASIC17.98■□□□□ 0.47
CCDC190Q86UF4 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC190Q86UF4 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC190Q86UF4 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC190Q86UF4 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC190Q86UF4 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC190Q86UF4 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
CCDC190Q86UF4 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC190Q86UF4 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC190Q86UF4 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.98■□□□□ 0.47
CCDC190Q86UF4 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC190Q86UF4 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC190Q86UF4 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC190Q86UF4 HYI-213ENST00000583037 1322 ntTSL 5 BASIC17.98■□□□□ 0.47
CCDC190Q86UF4 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC190Q86UF4 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC190Q86UF4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CCDC190Q86UF4 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC190Q86UF4 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC190Q86UF4 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CCDC190Q86UF4 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.97■□□□□ 0.47
CCDC190Q86UF4 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CCDC190Q86UF4 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC190Q86UF4 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC190Q86UF4 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.97■□□□□ 0.47
CCDC190Q86UF4 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC190Q86UF4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC190Q86UF4 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC190Q86UF4 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC190Q86UF4 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CCDC190Q86UF4 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC190Q86UF4 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CCDC190Q86UF4 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC190Q86UF4 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CCDC190Q86UF4 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC190Q86UF4 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC190Q86UF4 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC190Q86UF4 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC190Q86UF4 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC190Q86UF4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC190Q86UF4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC190Q86UF4 MIR7108-201ENST00000614319 87 ntBASIC17.96■□□□□ 0.47
CCDC190Q86UF4 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC190Q86UF4 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CCDC190Q86UF4 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC190Q86UF4 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC190Q86UF4 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC190Q86UF4 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC190Q86UF4 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC190Q86UF4 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC190Q86UF4 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CCDC190Q86UF4 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CCDC190Q86UF4 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.46
CCDC190Q86UF4 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC190Q86UF4 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC190Q86UF4 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CCDC190Q86UF4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC190Q86UF4 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC190Q86UF4 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CCDC190Q86UF4 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CCDC190Q86UF4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC190Q86UF4 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC190Q86UF4 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC190Q86UF4 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC190Q86UF4 SENP5-202ENST00000419026 973 ntTSL 3 BASIC17.95■□□□□ 0.46
CCDC190Q86UF4 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC190Q86UF4 AC139795.1-202ENST00000500444 432 ntBASIC17.95■□□□□ 0.46
CCDC190Q86UF4 RPS2-202ENST00000526522 924 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC190Q86UF4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC190Q86UF4 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC190Q86UF4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC190Q86UF4 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC190Q86UF4 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
CCDC190Q86UF4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CCDC190Q86UF4 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC190Q86UF4 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC190Q86UF4 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC190Q86UF4 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC190Q86UF4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC190Q86UF4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
CCDC190Q86UF4 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC190Q86UF4 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.94■□□□□ 0.46
CCDC190Q86UF4 AC093484.2-201ENST00000580996 2166 ntBASIC17.94■□□□□ 0.46
CCDC190Q86UF4 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC190Q86UF4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC190Q86UF4 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC190Q86UF4 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC190Q86UF4 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC190Q86UF4 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC190Q86UF4 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC17.94■□□□□ 0.46
CCDC190Q86UF4 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CCDC190Q86UF4 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CCDC190Q86UF4 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC190Q86UF4 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC190Q86UF4 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
CCDC190Q86UF4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms