Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
LINC00575Q6W349 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00575Q6W349 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
LINC00575Q6W349 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC13.06□□□□□ -0.32
LINC00575Q6W349 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00575Q6W349 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
LINC00575Q6W349 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC13.06□□□□□ -0.32
LINC00575Q6W349 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC13.06□□□□□ -0.32
LINC00575Q6W349 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00575Q6W349 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC13.06□□□□□ -0.32
LINC00575Q6W349 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00575Q6W349 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00575Q6W349 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00575Q6W349 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC13.06□□□□□ -0.32
LINC00575Q6W349 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC13.06□□□□□ -0.32
LINC00575Q6W349 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00575Q6W349 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC13.06□□□□□ -0.32
LINC00575Q6W349 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
LINC00575Q6W349 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00575Q6W349 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00575Q6W349 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00575Q6W349 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
LINC00575Q6W349 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC13.06□□□□□ -0.32
LINC00575Q6W349 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC13.06□□□□□ -0.32
LINC00575Q6W349 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC13.06□□□□□ -0.32
LINC00575Q6W349 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00575Q6W349 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
LINC00575Q6W349 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00575Q6W349 TCF3P1-201ENST00000423021 1937 ntBASIC13.05□□□□□ -0.32
LINC00575Q6W349 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00575Q6W349 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00575Q6W349 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC13.05□□□□□ -0.32
LINC00575Q6W349 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00575Q6W349 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00575Q6W349 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00575Q6W349 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00575Q6W349 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00575Q6W349 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00575Q6W349 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00575Q6W349 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00575Q6W349 GATM-206ENST00000558336 1522 ntTSL 2 BASIC13.05□□□□□ -0.32
LINC00575Q6W349 GTSE1-AS1-202ENST00000623117 1518 ntBASIC13.05□□□□□ -0.32
LINC00575Q6W349 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
LINC00575Q6W349 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00575Q6W349 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC13.05□□□□□ -0.32
LINC00575Q6W349 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC13.05□□□□□ -0.32
LINC00575Q6W349 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC13.05□□□□□ -0.32
LINC00575Q6W349 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
LINC00575Q6W349 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
LINC00575Q6W349 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00575Q6W349 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00575Q6W349 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00575Q6W349 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
LINC00575Q6W349 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00575Q6W349 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00575Q6W349 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00575Q6W349 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC13.05□□□□□ -0.32
LINC00575Q6W349 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00575Q6W349 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC13.05□□□□□ -0.32
LINC00575Q6W349 AP000974.1-201ENST00000623909 2387 ntBASIC13.05□□□□□ -0.32
LINC00575Q6W349 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC13.05□□□□□ -0.32
LINC00575Q6W349 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00575Q6W349 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC13.04□□□□□ -0.32
LINC00575Q6W349 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC13.04□□□□□ -0.32
LINC00575Q6W349 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00575Q6W349 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00575Q6W349 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
LINC00575Q6W349 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00575Q6W349 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00575Q6W349 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00575Q6W349 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00575Q6W349 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
LINC00575Q6W349 TK2-216ENST00000564917 1156 ntTSL 3 BASIC13.04□□□□□ -0.32
LINC00575Q6W349 AC241377.3-202ENST00000626088 1088 ntBASIC13.04□□□□□ -0.32
LINC00575Q6W349 AC241585.3-202ENST00000628937 1088 ntBASIC13.04□□□□□ -0.32
LINC00575Q6W349 AC245100.8-202ENST00000629247 1058 ntBASIC13.04□□□□□ -0.32
LINC00575Q6W349 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
LINC00575Q6W349 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC13.04□□□□□ -0.32
LINC00575Q6W349 TNXA-203ENST00000507684 2038 ntBASIC13.04□□□□□ -0.32
LINC00575Q6W349 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00575Q6W349 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC13.04□□□□□ -0.32
LINC00575Q6W349 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00575Q6W349 AC021242.3-201ENST00000607598 1377 ntBASIC13.04□□□□□ -0.32
LINC00575Q6W349 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
LINC00575Q6W349 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
LINC00575Q6W349 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00575Q6W349 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00575Q6W349 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
LINC00575Q6W349 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC13.03□□□□□ -0.32
LINC00575Q6W349 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00575Q6W349 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00575Q6W349 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00575Q6W349 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00575Q6W349 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
LINC00575Q6W349 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
LINC00575Q6W349 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC13.03□□□□□ -0.32
LINC00575Q6W349 AIRN-201ENST00000601203 4374 ntBASIC13.03□□□□□ -0.32
LINC00575Q6W349 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00575Q6W349 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LINC00575Q6W349 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms