Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.5■□□□□ 0.55
NHLRC1Q6VVB1 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.5■□□□□ 0.55
NHLRC1Q6VVB1 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.5■□□□□ 0.55
NHLRC1Q6VVB1 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.5■□□□□ 0.55
NHLRC1Q6VVB1 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NHLRC1Q6VVB1 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NHLRC1Q6VVB1 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NHLRC1Q6VVB1 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.5■□□□□ 0.55
NHLRC1Q6VVB1 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.5■□□□□ 0.55
NHLRC1Q6VVB1 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.5■□□□□ 0.55
NHLRC1Q6VVB1 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NHLRC1Q6VVB1 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NHLRC1Q6VVB1 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.49■□□□□ 0.55
NHLRC1Q6VVB1 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
NHLRC1Q6VVB1 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NHLRC1Q6VVB1 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.49■□□□□ 0.55
NHLRC1Q6VVB1 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NHLRC1Q6VVB1 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.49■□□□□ 0.55
NHLRC1Q6VVB1 AC121338.2-201ENST00000622535 1744 ntBASIC18.49■□□□□ 0.55
NHLRC1Q6VVB1 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NHLRC1Q6VVB1 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NHLRC1Q6VVB1 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.49■□□□□ 0.55
NHLRC1Q6VVB1 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.49■□□□□ 0.55
NHLRC1Q6VVB1 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.49■□□□□ 0.55
NHLRC1Q6VVB1 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.49■□□□□ 0.55
NHLRC1Q6VVB1 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.49■□□□□ 0.55
NHLRC1Q6VVB1 AC243732.1-201ENST00000612648 864 ntBASIC18.49■□□□□ 0.55
NHLRC1Q6VVB1 AC120498.10-201ENST00000621827 505 ntBASIC18.49■□□□□ 0.55
NHLRC1Q6VVB1 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.49■□□□□ 0.55
NHLRC1Q6VVB1 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NHLRC1Q6VVB1 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NHLRC1Q6VVB1 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NHLRC1Q6VVB1 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NHLRC1Q6VVB1 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.49■□□□□ 0.55
NHLRC1Q6VVB1 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NHLRC1Q6VVB1 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NHLRC1Q6VVB1 RBM17P2-201ENST00000616397 1405 ntBASIC18.49■□□□□ 0.55
NHLRC1Q6VVB1 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NHLRC1Q6VVB1 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.48■□□□□ 0.55
NHLRC1Q6VVB1 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NHLRC1Q6VVB1 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NHLRC1Q6VVB1 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.48■□□□□ 0.55
NHLRC1Q6VVB1 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NHLRC1Q6VVB1 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NHLRC1Q6VVB1 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NHLRC1Q6VVB1 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
NHLRC1Q6VVB1 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NHLRC1Q6VVB1 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NHLRC1Q6VVB1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NHLRC1Q6VVB1 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NHLRC1Q6VVB1 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NHLRC1Q6VVB1 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.48■□□□□ 0.55
NHLRC1Q6VVB1 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NHLRC1Q6VVB1 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NHLRC1Q6VVB1 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.48■□□□□ 0.55
NHLRC1Q6VVB1 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.48■□□□□ 0.55
NHLRC1Q6VVB1 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NHLRC1Q6VVB1 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
NHLRC1Q6VVB1 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.48■□□□□ 0.55
NHLRC1Q6VVB1 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.48■□□□□ 0.55
NHLRC1Q6VVB1 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NHLRC1Q6VVB1 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
NHLRC1Q6VVB1 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NHLRC1Q6VVB1 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NHLRC1Q6VVB1 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NHLRC1Q6VVB1 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NHLRC1Q6VVB1 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.47■□□□□ 0.55
NHLRC1Q6VVB1 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.47■□□□□ 0.55
NHLRC1Q6VVB1 UBE2DNL-204ENST00000602536 740 ntBASIC18.47■□□□□ 0.55
NHLRC1Q6VVB1 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NHLRC1Q6VVB1 AC011484.1-201ENST00000377652 1995 ntBASIC18.47■□□□□ 0.55
NHLRC1Q6VVB1 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.47■□□□□ 0.55
NHLRC1Q6VVB1 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
NHLRC1Q6VVB1 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NHLRC1Q6VVB1 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
NHLRC1Q6VVB1 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NHLRC1Q6VVB1 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.47■□□□□ 0.55
NHLRC1Q6VVB1 AC006128.1-201ENST00000624704 1661 ntBASIC18.47■□□□□ 0.55
NHLRC1Q6VVB1 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NHLRC1Q6VVB1 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NHLRC1Q6VVB1 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NHLRC1Q6VVB1 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NHLRC1Q6VVB1 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
NHLRC1Q6VVB1 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NHLRC1Q6VVB1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.46■□□□□ 0.55
NHLRC1Q6VVB1 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NHLRC1Q6VVB1 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NHLRC1Q6VVB1 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.46■□□□□ 0.55
NHLRC1Q6VVB1 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.46■□□□□ 0.55
NHLRC1Q6VVB1 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.46■□□□□ 0.55
NHLRC1Q6VVB1 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NHLRC1Q6VVB1 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NHLRC1Q6VVB1 AL162430.1-201ENST00000480705 870 ntBASIC18.46■□□□□ 0.55
NHLRC1Q6VVB1 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
NHLRC1Q6VVB1 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.46■□□□□ 0.55
NHLRC1Q6VVB1 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.46■□□□□ 0.55
NHLRC1Q6VVB1 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
NHLRC1Q6VVB1 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
NHLRC1Q6VVB1 AL391422.3-201ENST00000603791 2761 ntBASIC18.46■□□□□ 0.55
NHLRC1Q6VVB1 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms