Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.75■□□□□ 0.59
NIPAL3Q6P499 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.75■□□□□ 0.59
NIPAL3Q6P499 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NIPAL3Q6P499 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.75■□□□□ 0.59
NIPAL3Q6P499 AC053503.5-201ENST00000601508 636 ntBASIC18.75■□□□□ 0.59
NIPAL3Q6P499 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
NIPAL3Q6P499 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.75■□□□□ 0.59
NIPAL3Q6P499 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NIPAL3Q6P499 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
NIPAL3Q6P499 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NIPAL3Q6P499 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NIPAL3Q6P499 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NIPAL3Q6P499 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.74■□□□□ 0.59
NIPAL3Q6P499 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.74■□□□□ 0.59
NIPAL3Q6P499 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.74■□□□□ 0.59
NIPAL3Q6P499 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.74■□□□□ 0.59
NIPAL3Q6P499 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.74■□□□□ 0.59
NIPAL3Q6P499 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.74■□□□□ 0.59
NIPAL3Q6P499 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.74■□□□□ 0.59
NIPAL3Q6P499 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NIPAL3Q6P499 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
NIPAL3Q6P499 AC004854.2-201ENST00000608450 1441 ntBASIC18.74■□□□□ 0.59
NIPAL3Q6P499 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
NIPAL3Q6P499 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
NIPAL3Q6P499 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NIPAL3Q6P499 AL121603.2-201ENST00000557373 2117 ntBASIC18.73■□□□□ 0.59
NIPAL3Q6P499 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NIPAL3Q6P499 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.73■□□□□ 0.59
NIPAL3Q6P499 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
NIPAL3Q6P499 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NIPAL3Q6P499 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NIPAL3Q6P499 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.73■□□□□ 0.59
NIPAL3Q6P499 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NIPAL3Q6P499 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
NIPAL3Q6P499 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NIPAL3Q6P499 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.73■□□□□ 0.59
NIPAL3Q6P499 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.73■□□□□ 0.59
NIPAL3Q6P499 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.73■□□□□ 0.59
NIPAL3Q6P499 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
NIPAL3Q6P499 MIR5787-201ENST00000611784 55 ntBASIC18.73■□□□□ 0.59
NIPAL3Q6P499 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.73■□□□□ 0.59
NIPAL3Q6P499 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
NIPAL3Q6P499 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.73■□□□□ 0.59
NIPAL3Q6P499 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NIPAL3Q6P499 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
NIPAL3Q6P499 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
NIPAL3Q6P499 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NIPAL3Q6P499 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NIPAL3Q6P499 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
NIPAL3Q6P499 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
NIPAL3Q6P499 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
NIPAL3Q6P499 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NIPAL3Q6P499 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.72■□□□□ 0.59
NIPAL3Q6P499 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NIPAL3Q6P499 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NIPAL3Q6P499 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NIPAL3Q6P499 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
NIPAL3Q6P499 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NIPAL3Q6P499 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.72■□□□□ 0.59
NIPAL3Q6P499 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.72■□□□□ 0.59
NIPAL3Q6P499 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.72■□□□□ 0.59
NIPAL3Q6P499 NTF6G-201ENST00000591094 616 ntBASIC18.72■□□□□ 0.59
NIPAL3Q6P499 AC104187.1-201ENST00000607510 612 ntBASIC18.72■□□□□ 0.59
NIPAL3Q6P499 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.72■□□□□ 0.59
NIPAL3Q6P499 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NIPAL3Q6P499 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NIPAL3Q6P499 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
NIPAL3Q6P499 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.72■□□□□ 0.59
NIPAL3Q6P499 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NIPAL3Q6P499 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.72■□□□□ 0.59
NIPAL3Q6P499 AC121338.2-201ENST00000622535 1744 ntBASIC18.71■□□□□ 0.59
NIPAL3Q6P499 AP004607.4-201ENST00000530158 1459 ntBASIC18.71■□□□□ 0.59
NIPAL3Q6P499 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NIPAL3Q6P499 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NIPAL3Q6P499 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NIPAL3Q6P499 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NIPAL3Q6P499 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.71■□□□□ 0.59
NIPAL3Q6P499 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NIPAL3Q6P499 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
NIPAL3Q6P499 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
NIPAL3Q6P499 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.71■□□□□ 0.59
NIPAL3Q6P499 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NIPAL3Q6P499 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.71■□□□□ 0.59
NIPAL3Q6P499 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NIPAL3Q6P499 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NIPAL3Q6P499 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
NIPAL3Q6P499 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.71■□□□□ 0.59
NIPAL3Q6P499 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NIPAL3Q6P499 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.71■□□□□ 0.59
NIPAL3Q6P499 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.71■□□□□ 0.59
NIPAL3Q6P499 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.71■□□□□ 0.59
NIPAL3Q6P499 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.71■□□□□ 0.59
NIPAL3Q6P499 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.71■□□□□ 0.59
NIPAL3Q6P499 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NIPAL3Q6P499 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.71■□□□□ 0.59
NIPAL3Q6P499 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NIPAL3Q6P499 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NIPAL3Q6P499 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NIPAL3Q6P499 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
NIPAL3Q6P499 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms