Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.31■□□□□ 0.84
RIF1Q5UIP0 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.31■□□□□ 0.84
RIF1Q5UIP0 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RIF1Q5UIP0 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RIF1Q5UIP0 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.3■□□□□ 0.84
RIF1Q5UIP0 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RIF1Q5UIP0 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RIF1Q5UIP0 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RIF1Q5UIP0 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RIF1Q5UIP0 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RIF1Q5UIP0 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RIF1Q5UIP0 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.3■□□□□ 0.84
RIF1Q5UIP0 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.3■□□□□ 0.84
RIF1Q5UIP0 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.29■□□□□ 0.84
RIF1Q5UIP0 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RIF1Q5UIP0 AC004812.2-201ENST00000611079 2094 ntBASIC20.29■□□□□ 0.84
RIF1Q5UIP0 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RIF1Q5UIP0 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RIF1Q5UIP0 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RIF1Q5UIP0 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.29■□□□□ 0.84
RIF1Q5UIP0 AC091799.1-201ENST00000422823 811 ntBASIC20.29■□□□□ 0.84
RIF1Q5UIP0 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.29■□□□□ 0.84
RIF1Q5UIP0 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.29■□□□□ 0.84
RIF1Q5UIP0 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
RIF1Q5UIP0 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
RIF1Q5UIP0 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RIF1Q5UIP0 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RIF1Q5UIP0 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.29■□□□□ 0.84
RIF1Q5UIP0 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RIF1Q5UIP0 FITM1-202ENST00000559294 800 ntBASIC20.29■□□□□ 0.84
RIF1Q5UIP0 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
RIF1Q5UIP0 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RIF1Q5UIP0 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.28■□□□□ 0.84
RIF1Q5UIP0 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.28■□□□□ 0.84
RIF1Q5UIP0 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.28■□□□□ 0.84
RIF1Q5UIP0 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.28■□□□□ 0.84
RIF1Q5UIP0 BX664615.1-201ENST00000443558 458 ntBASIC20.28■□□□□ 0.84
RIF1Q5UIP0 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RIF1Q5UIP0 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.28■□□□□ 0.84
RIF1Q5UIP0 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.28■□□□□ 0.84
RIF1Q5UIP0 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RIF1Q5UIP0 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RIF1Q5UIP0 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RIF1Q5UIP0 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RIF1Q5UIP0 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.28■□□□□ 0.84
RIF1Q5UIP0 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.28■□□□□ 0.84
RIF1Q5UIP0 AP000550.4-202ENST00000639755 178 ntBASIC20.28■□□□□ 0.84
RIF1Q5UIP0 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RIF1Q5UIP0 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
RIF1Q5UIP0 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.27■□□□□ 0.84
RIF1Q5UIP0 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RIF1Q5UIP0 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.27■□□□□ 0.84
RIF1Q5UIP0 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.27■□□□□ 0.84
RIF1Q5UIP0 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
RIF1Q5UIP0 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.27■□□□□ 0.84
RIF1Q5UIP0 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RIF1Q5UIP0 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
RIF1Q5UIP0 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RIF1Q5UIP0 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
RIF1Q5UIP0 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RIF1Q5UIP0 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
RIF1Q5UIP0 C2orf69P3-201ENST00000565542 1120 ntBASIC20.27■□□□□ 0.83
RIF1Q5UIP0 MYC-208ENST00000641036 567 ntBASIC20.27■□□□□ 0.83
RIF1Q5UIP0 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RIF1Q5UIP0 ABCB10P4-201ENST00000566803 2184 ntBASIC20.26■□□□□ 0.83
RIF1Q5UIP0 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RIF1Q5UIP0 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RIF1Q5UIP0 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RIF1Q5UIP0 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.26■□□□□ 0.83
RIF1Q5UIP0 AC005829.2-201ENST00000571422 1056 ntBASIC20.26■□□□□ 0.83
RIF1Q5UIP0 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.26■□□□□ 0.83
RIF1Q5UIP0 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RIF1Q5UIP0 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.26■□□□□ 0.83
RIF1Q5UIP0 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.26■□□□□ 0.83
RIF1Q5UIP0 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.26■□□□□ 0.83
RIF1Q5UIP0 UNC93B2-201ENST00000285383 730 ntBASIC20.26■□□□□ 0.83
RIF1Q5UIP0 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
RIF1Q5UIP0 AC245052.3-201ENST00000450182 901 ntBASIC20.26■□□□□ 0.83
RIF1Q5UIP0 AC023511.2-201ENST00000618803 211 ntBASIC20.26■□□□□ 0.83
RIF1Q5UIP0 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.25■□□□□ 0.83
RIF1Q5UIP0 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
RIF1Q5UIP0 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RIF1Q5UIP0 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RIF1Q5UIP0 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.25■□□□□ 0.83
RIF1Q5UIP0 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.25■□□□□ 0.83
RIF1Q5UIP0 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.25■□□□□ 0.83
RIF1Q5UIP0 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.25■□□□□ 0.83
RIF1Q5UIP0 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
RIF1Q5UIP0 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.25■□□□□ 0.83
RIF1Q5UIP0 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.25■□□□□ 0.83
RIF1Q5UIP0 AC063952.2-201ENST00000498792 1227 ntBASIC20.25■□□□□ 0.83
RIF1Q5UIP0 AC004263.2-201ENST00000617183 678 ntBASIC20.25■□□□□ 0.83
RIF1Q5UIP0 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RIF1Q5UIP0 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RIF1Q5UIP0 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RIF1Q5UIP0 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
RIF1Q5UIP0 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.24■□□□□ 0.83
RIF1Q5UIP0 AL031133.1-201ENST00000406807 723 ntBASIC20.24■□□□□ 0.83
RIF1Q5UIP0 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RIF1Q5UIP0 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms