Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.19■□□□□ 0.5
FREM1Q5H8C1 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
FREM1Q5H8C1 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FREM1Q5H8C1 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FREM1Q5H8C1 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.19■□□□□ 0.5
FREM1Q5H8C1 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
FREM1Q5H8C1 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.18■□□□□ 0.5
FREM1Q5H8C1 MYC-209ENST00000641252 345 ntBASIC18.18■□□□□ 0.5
FREM1Q5H8C1 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FREM1Q5H8C1 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
FREM1Q5H8C1 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FREM1Q5H8C1 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.18■□□□□ 0.5
FREM1Q5H8C1 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FREM1Q5H8C1 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
FREM1Q5H8C1 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FREM1Q5H8C1 CDV3P1-201ENST00000471403 739 ntBASIC18.18■□□□□ 0.5
FREM1Q5H8C1 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.18■□□□□ 0.5
FREM1Q5H8C1 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.18■□□□□ 0.5
FREM1Q5H8C1 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FREM1Q5H8C1 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FREM1Q5H8C1 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FREM1Q5H8C1 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
FREM1Q5H8C1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
FREM1Q5H8C1 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FREM1Q5H8C1 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FREM1Q5H8C1 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FREM1Q5H8C1 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
FREM1Q5H8C1 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
FREM1Q5H8C1 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.18■□□□□ 0.5
FREM1Q5H8C1 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
FREM1Q5H8C1 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.17■□□□□ 0.5
FREM1Q5H8C1 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
FREM1Q5H8C1 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.17■□□□□ 0.5
FREM1Q5H8C1 AC091874.3-201ENST00000512672 1195 ntBASIC18.17■□□□□ 0.5
FREM1Q5H8C1 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.17■□□□□ 0.5
FREM1Q5H8C1 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FREM1Q5H8C1 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
FREM1Q5H8C1 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
FREM1Q5H8C1 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.17■□□□□ 0.5
FREM1Q5H8C1 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
FREM1Q5H8C1 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.17■□□□□ 0.5
FREM1Q5H8C1 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FREM1Q5H8C1 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FREM1Q5H8C1 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.17■□□□□ 0.5
FREM1Q5H8C1 CYP2T3P-201ENST00000601990 817 ntBASIC18.17■□□□□ 0.5
FREM1Q5H8C1 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FREM1Q5H8C1 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
FREM1Q5H8C1 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FREM1Q5H8C1 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
FREM1Q5H8C1 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
FREM1Q5H8C1 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FREM1Q5H8C1 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.16■□□□□ 0.5
FREM1Q5H8C1 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
FREM1Q5H8C1 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
FREM1Q5H8C1 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FREM1Q5H8C1 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
FREM1Q5H8C1 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FREM1Q5H8C1 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FREM1Q5H8C1 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.16■□□□□ 0.5
FREM1Q5H8C1 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
FREM1Q5H8C1 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
FREM1Q5H8C1 AL356652.1-201ENST00000615962 565 ntBASIC18.16■□□□□ 0.5
FREM1Q5H8C1 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.16■□□□□ 0.5
FREM1Q5H8C1 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.16■□□□□ 0.5
FREM1Q5H8C1 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
FREM1Q5H8C1 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.16■□□□□ 0.5
FREM1Q5H8C1 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
FREM1Q5H8C1 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
FREM1Q5H8C1 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
FREM1Q5H8C1 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.16■□□□□ 0.5
FREM1Q5H8C1 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FREM1Q5H8C1 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
FREM1Q5H8C1 MIR4651-201ENST00000582622 73 ntBASIC18.15■□□□□ 0.5
FREM1Q5H8C1 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.15■□□□□ 0.5
FREM1Q5H8C1 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
FREM1Q5H8C1 AC100791.3-201ENST00000617619 330 ntBASIC18.15■□□□□ 0.5
FREM1Q5H8C1 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.15■□□□□ 0.5
FREM1Q5H8C1 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
FREM1Q5H8C1 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
FREM1Q5H8C1 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FREM1Q5H8C1 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
FREM1Q5H8C1 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
FREM1Q5H8C1 MCRIP2P1-201ENST00000394346 511 ntBASIC18.15■□□□□ 0.5
FREM1Q5H8C1 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.15■□□□□ 0.5
FREM1Q5H8C1 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FREM1Q5H8C1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
FREM1Q5H8C1 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.15■□□□□ 0.5
FREM1Q5H8C1 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
FREM1Q5H8C1 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
FREM1Q5H8C1 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
FREM1Q5H8C1 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
FREM1Q5H8C1 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
FREM1Q5H8C1 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FREM1Q5H8C1 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
FREM1Q5H8C1 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FREM1Q5H8C1 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
FREM1Q5H8C1 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.14■□□□□ 0.49
FREM1Q5H8C1 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
FREM1Q5H8C1 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.14■□□□□ 0.49
FREM1Q5H8C1 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms