Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RUNDC3AQ59EK9 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RUNDC3AQ59EK9 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RUNDC3AQ59EK9 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.47■□□□□ 0.71
RUNDC3AQ59EK9 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
RUNDC3AQ59EK9 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.47■□□□□ 0.71
RUNDC3AQ59EK9 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.47■□□□□ 0.71
RUNDC3AQ59EK9 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.47■□□□□ 0.71
RUNDC3AQ59EK9 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.47■□□□□ 0.71
RUNDC3AQ59EK9 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RUNDC3AQ59EK9 AC112907.3-201ENST00000577781 2400 ntBASIC19.47■□□□□ 0.71
RUNDC3AQ59EK9 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RUNDC3AQ59EK9 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RUNDC3AQ59EK9 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RUNDC3AQ59EK9 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RUNDC3AQ59EK9 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.47■□□□□ 0.71
RUNDC3AQ59EK9 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.47■□□□□ 0.71
RUNDC3AQ59EK9 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.47■□□□□ 0.71
RUNDC3AQ59EK9 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RUNDC3AQ59EK9 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RUNDC3AQ59EK9 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
RUNDC3AQ59EK9 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RUNDC3AQ59EK9 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
RUNDC3AQ59EK9 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.46■□□□□ 0.71
RUNDC3AQ59EK9 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RUNDC3AQ59EK9 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RUNDC3AQ59EK9 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RUNDC3AQ59EK9 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
RUNDC3AQ59EK9 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.46■□□□□ 0.71
RUNDC3AQ59EK9 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RUNDC3AQ59EK9 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RUNDC3AQ59EK9 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
RUNDC3AQ59EK9 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RUNDC3AQ59EK9 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RUNDC3AQ59EK9 AC007952.6-201ENST00000573168 2673 ntBASIC19.46■□□□□ 0.71
RUNDC3AQ59EK9 AC003957.1-201ENST00000625108 2673 ntBASIC19.46■□□□□ 0.71
RUNDC3AQ59EK9 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RUNDC3AQ59EK9 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.46■□□□□ 0.71
RUNDC3AQ59EK9 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RUNDC3AQ59EK9 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RUNDC3AQ59EK9 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.46■□□□□ 0.71
RUNDC3AQ59EK9 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RUNDC3AQ59EK9 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RUNDC3AQ59EK9 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RUNDC3AQ59EK9 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.45■□□□□ 0.7
RUNDC3AQ59EK9 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RUNDC3AQ59EK9 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
RUNDC3AQ59EK9 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
RUNDC3AQ59EK9 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.45■□□□□ 0.7
RUNDC3AQ59EK9 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
RUNDC3AQ59EK9 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.45■□□□□ 0.7
RUNDC3AQ59EK9 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.45■□□□□ 0.7
RUNDC3AQ59EK9 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.45■□□□□ 0.7
RUNDC3AQ59EK9 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RUNDC3AQ59EK9 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RUNDC3AQ59EK9 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RUNDC3AQ59EK9 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RUNDC3AQ59EK9 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RUNDC3AQ59EK9 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RUNDC3AQ59EK9 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.44■□□□□ 0.7
RUNDC3AQ59EK9 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.44■□□□□ 0.7
RUNDC3AQ59EK9 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RUNDC3AQ59EK9 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.44■□□□□ 0.7
RUNDC3AQ59EK9 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RUNDC3AQ59EK9 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RUNDC3AQ59EK9 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RUNDC3AQ59EK9 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.44■□□□□ 0.7
RUNDC3AQ59EK9 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RUNDC3AQ59EK9 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.44■□□□□ 0.7
RUNDC3AQ59EK9 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.44■□□□□ 0.7
RUNDC3AQ59EK9 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.44■□□□□ 0.7
RUNDC3AQ59EK9 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.44■□□□□ 0.7
RUNDC3AQ59EK9 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.44■□□□□ 0.7
RUNDC3AQ59EK9 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RUNDC3AQ59EK9 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.44■□□□□ 0.7
RUNDC3AQ59EK9 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RUNDC3AQ59EK9 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RUNDC3AQ59EK9 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RUNDC3AQ59EK9 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RUNDC3AQ59EK9 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RUNDC3AQ59EK9 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
RUNDC3AQ59EK9 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
RUNDC3AQ59EK9 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
RUNDC3AQ59EK9 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.43■□□□□ 0.7
RUNDC3AQ59EK9 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RUNDC3AQ59EK9 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RUNDC3AQ59EK9 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RUNDC3AQ59EK9 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RUNDC3AQ59EK9 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
RUNDC3AQ59EK9 PBX2P1-201ENST00000493219 1291 ntBASIC19.43■□□□□ 0.7
RUNDC3AQ59EK9 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RUNDC3AQ59EK9 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RUNDC3AQ59EK9 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RUNDC3AQ59EK9 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RUNDC3AQ59EK9 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.43■□□□□ 0.7
RUNDC3AQ59EK9 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.42■□□□□ 0.7
RUNDC3AQ59EK9 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.42■□□□□ 0.7
RUNDC3AQ59EK9 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.42■□□□□ 0.7
RUNDC3AQ59EK9 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RUNDC3AQ59EK9 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms