Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
ATP6AP1LQ52LC2 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP6AP1LQ52LC2 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
ATP6AP1LQ52LC2 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.92■□□□□ 0.78
ATP6AP1LQ52LC2 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.92■□□□□ 0.78
ATP6AP1LQ52LC2 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP6AP1LQ52LC2 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ATP6AP1LQ52LC2 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP6AP1LQ52LC2 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.91■□□□□ 0.78
ATP6AP1LQ52LC2 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP6AP1LQ52LC2 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
ATP6AP1LQ52LC2 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP6AP1LQ52LC2 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
ATP6AP1LQ52LC2 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP6AP1LQ52LC2 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ATP6AP1LQ52LC2 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP6AP1LQ52LC2 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP6AP1LQ52LC2 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP6AP1LQ52LC2 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.91■□□□□ 0.78
ATP6AP1LQ52LC2 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ATP6AP1LQ52LC2 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ATP6AP1LQ52LC2 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.91■□□□□ 0.78
ATP6AP1LQ52LC2 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.91■□□□□ 0.78
ATP6AP1LQ52LC2 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP6AP1LQ52LC2 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
ATP6AP1LQ52LC2 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
ATP6AP1LQ52LC2 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP6AP1LQ52LC2 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATP6AP1LQ52LC2 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP6AP1LQ52LC2 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATP6AP1LQ52LC2 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP6AP1LQ52LC2 AC008175.2-201ENST00000612840 297 ntBASIC19.9■□□□□ 0.78
ATP6AP1LQ52LC2 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.9■□□□□ 0.78
ATP6AP1LQ52LC2 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP6AP1LQ52LC2 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATP6AP1LQ52LC2 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATP6AP1LQ52LC2 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.9■□□□□ 0.78
ATP6AP1LQ52LC2 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
ATP6AP1LQ52LC2 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
ATP6AP1LQ52LC2 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP6AP1LQ52LC2 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
ATP6AP1LQ52LC2 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
ATP6AP1LQ52LC2 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.89■□□□□ 0.77
ATP6AP1LQ52LC2 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
ATP6AP1LQ52LC2 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATP6AP1LQ52LC2 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATP6AP1LQ52LC2 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
ATP6AP1LQ52LC2 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ATP6AP1LQ52LC2 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.89■□□□□ 0.77
ATP6AP1LQ52LC2 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATP6AP1LQ52LC2 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATP6AP1LQ52LC2 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.89■□□□□ 0.77
ATP6AP1LQ52LC2 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.89■□□□□ 0.77
ATP6AP1LQ52LC2 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATP6AP1LQ52LC2 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ATP6AP1LQ52LC2 TPRG1LP1-201ENST00000598702 760 ntBASIC19.89■□□□□ 0.77
ATP6AP1LQ52LC2 AL031432.3-201ENST00000607698 485 ntBASIC19.89■□□□□ 0.77
ATP6AP1LQ52LC2 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ATP6AP1LQ52LC2 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP6AP1LQ52LC2 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.88■□□□□ 0.77
ATP6AP1LQ52LC2 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP6AP1LQ52LC2 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP6AP1LQ52LC2 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
ATP6AP1LQ52LC2 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.88■□□□□ 0.77
ATP6AP1LQ52LC2 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ATP6AP1LQ52LC2 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.88■□□□□ 0.77
ATP6AP1LQ52LC2 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ATP6AP1LQ52LC2 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP6AP1LQ52LC2 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP6AP1LQ52LC2 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ATP6AP1LQ52LC2 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
ATP6AP1LQ52LC2 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
ATP6AP1LQ52LC2 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.88■□□□□ 0.77
ATP6AP1LQ52LC2 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ATP6AP1LQ52LC2 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ATP6AP1LQ52LC2 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP6AP1LQ52LC2 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ATP6AP1LQ52LC2 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP6AP1LQ52LC2 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ATP6AP1LQ52LC2 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
ATP6AP1LQ52LC2 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP6AP1LQ52LC2 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATP6AP1LQ52LC2 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.87■□□□□ 0.77
ATP6AP1LQ52LC2 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
ATP6AP1LQ52LC2 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
ATP6AP1LQ52LC2 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATP6AP1LQ52LC2 POU5F1P4-201ENST00000413175 1085 ntBASIC19.87■□□□□ 0.77
ATP6AP1LQ52LC2 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.87■□□□□ 0.77
ATP6AP1LQ52LC2 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.87■□□□□ 0.77
ATP6AP1LQ52LC2 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ATP6AP1LQ52LC2 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.87■□□□□ 0.77
ATP6AP1LQ52LC2 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.87■□□□□ 0.77
ATP6AP1LQ52LC2 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATP6AP1LQ52LC2 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.87■□□□□ 0.77
ATP6AP1LQ52LC2 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ATP6AP1LQ52LC2 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.87■□□□□ 0.77
ATP6AP1LQ52LC2 AL391422.3-201ENST00000603791 2761 ntBASIC19.87■□□□□ 0.77
ATP6AP1LQ52LC2 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATP6AP1LQ52LC2 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
ATP6AP1LQ52LC2 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms