Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC58Q4VC31 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
CCDC58Q4VC31 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC58Q4VC31 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC58Q4VC31 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CCDC58Q4VC31 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CCDC58Q4VC31 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC58Q4VC31 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC58Q4VC31 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC58Q4VC31 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC58Q4VC31 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC58Q4VC31 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC58Q4VC31 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC58Q4VC31 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CCDC58Q4VC31 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC58Q4VC31 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CCDC58Q4VC31 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC58Q4VC31 SMUG1P1-201ENST00000590640 811 ntBASIC18.36■□□□□ 0.53
CCDC58Q4VC31 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC58Q4VC31 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC58Q4VC31 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
CCDC58Q4VC31 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC58Q4VC31 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC58Q4VC31 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC58Q4VC31 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC58Q4VC31 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.35■□□□□ 0.53
CCDC58Q4VC31 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC58Q4VC31 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CCDC58Q4VC31 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC58Q4VC31 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC58Q4VC31 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC58Q4VC31 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC58Q4VC31 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC58Q4VC31 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC58Q4VC31 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
CCDC58Q4VC31 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CCDC58Q4VC31 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CCDC58Q4VC31 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC58Q4VC31 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC58Q4VC31 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC58Q4VC31 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC58Q4VC31 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC58Q4VC31 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CCDC58Q4VC31 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC58Q4VC31 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC58Q4VC31 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC58Q4VC31 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC58Q4VC31 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC58Q4VC31 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC58Q4VC31 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC58Q4VC31 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CCDC58Q4VC31 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC58Q4VC31 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.34■□□□□ 0.53
CCDC58Q4VC31 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.34■□□□□ 0.53
CCDC58Q4VC31 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC58Q4VC31 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC58Q4VC31 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC58Q4VC31 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC58Q4VC31 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC58Q4VC31 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC58Q4VC31 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC58Q4VC31 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC58Q4VC31 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC58Q4VC31 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC58Q4VC31 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC58Q4VC31 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
CCDC58Q4VC31 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC58Q4VC31 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC58Q4VC31 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC58Q4VC31 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC58Q4VC31 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC58Q4VC31 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC58Q4VC31 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC58Q4VC31 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC58Q4VC31 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.33■□□□□ 0.52
CCDC58Q4VC31 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.33■□□□□ 0.52
CCDC58Q4VC31 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC58Q4VC31 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CCDC58Q4VC31 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC58Q4VC31 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC58Q4VC31 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC58Q4VC31 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC58Q4VC31 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC58Q4VC31 AC009237.3-201ENST00000393279 1427 ntBASIC18.32■□□□□ 0.52
CCDC58Q4VC31 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CCDC58Q4VC31 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CCDC58Q4VC31 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC58Q4VC31 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC58Q4VC31 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CCDC58Q4VC31 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.32■□□□□ 0.52
CCDC58Q4VC31 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC58Q4VC31 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC58Q4VC31 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
CCDC58Q4VC31 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC58Q4VC31 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC58Q4VC31 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC58Q4VC31 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
CCDC58Q4VC31 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC58Q4VC31 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
CCDC58Q4VC31 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms