Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC23.75■■□□□ 1.39
USH1GQ495M9 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
USH1GQ495M9 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
USH1GQ495M9 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
USH1GQ495M9 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
USH1GQ495M9 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
USH1GQ495M9 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC23.75■■□□□ 1.39
USH1GQ495M9 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
USH1GQ495M9 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
USH1GQ495M9 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
USH1GQ495M9 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
USH1GQ495M9 EXOC3-AS1-202ENST00000623673 1663 ntBASIC23.74■■□□□ 1.39
USH1GQ495M9 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
USH1GQ495M9 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
USH1GQ495M9 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC23.74■■□□□ 1.39
USH1GQ495M9 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
USH1GQ495M9 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
USH1GQ495M9 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
USH1GQ495M9 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
USH1GQ495M9 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
USH1GQ495M9 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC23.74■■□□□ 1.39
USH1GQ495M9 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
USH1GQ495M9 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
USH1GQ495M9 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
USH1GQ495M9 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
USH1GQ495M9 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
USH1GQ495M9 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
USH1GQ495M9 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
USH1GQ495M9 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC23.73■■□□□ 1.39
USH1GQ495M9 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC23.73■■□□□ 1.39
USH1GQ495M9 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
USH1GQ495M9 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.73■■□□□ 1.39
USH1GQ495M9 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
USH1GQ495M9 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
USH1GQ495M9 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
USH1GQ495M9 CYP21A1P-202ENST00000354927 1481 ntBASIC23.73■■□□□ 1.39
USH1GQ495M9 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
USH1GQ495M9 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
USH1GQ495M9 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC23.73■■□□□ 1.39
USH1GQ495M9 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC23.73■■□□□ 1.39
USH1GQ495M9 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
USH1GQ495M9 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
USH1GQ495M9 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
USH1GQ495M9 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
USH1GQ495M9 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC23.72■■□□□ 1.39
USH1GQ495M9 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
USH1GQ495M9 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
USH1GQ495M9 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC23.72■■□□□ 1.39
USH1GQ495M9 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC23.72■■□□□ 1.39
USH1GQ495M9 AL024507.2-201ENST00000606070 2574 ntBASIC23.72■■□□□ 1.39
USH1GQ495M9 LINC00565-201ENST00000562710 2331 ntBASIC23.71■■□□□ 1.39
USH1GQ495M9 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
USH1GQ495M9 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
USH1GQ495M9 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC23.71■■□□□ 1.39
USH1GQ495M9 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC23.71■■□□□ 1.39
USH1GQ495M9 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
USH1GQ495M9 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
USH1GQ495M9 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.71■■□□□ 1.39
USH1GQ495M9 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC23.7■■□□□ 1.39
USH1GQ495M9 PARN-205ENST00000539279 1557 ntTSL 2 BASIC23.7■■□□□ 1.38
USH1GQ495M9 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC23.7■■□□□ 1.38
USH1GQ495M9 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
USH1GQ495M9 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
USH1GQ495M9 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC23.7■■□□□ 1.38
USH1GQ495M9 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC23.7■■□□□ 1.38
USH1GQ495M9 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
USH1GQ495M9 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.38
USH1GQ495M9 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
USH1GQ495M9 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
USH1GQ495M9 KRT18P68-201ENST00000392293 1000 ntBASIC23.7■■□□□ 1.38
USH1GQ495M9 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC23.7■■□□□ 1.38
USH1GQ495M9 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
USH1GQ495M9 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC23.7■■□□□ 1.38
USH1GQ495M9 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
USH1GQ495M9 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
USH1GQ495M9 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
USH1GQ495M9 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
USH1GQ495M9 GCK-205ENST00000437084 1385 ntTSL 5 BASIC23.69■■□□□ 1.38
USH1GQ495M9 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
USH1GQ495M9 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
USH1GQ495M9 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
USH1GQ495M9 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC23.69■■□□□ 1.38
USH1GQ495M9 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
USH1GQ495M9 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
USH1GQ495M9 AL589743.5-201ENST00000616611 1050 ntBASIC23.69■■□□□ 1.38
USH1GQ495M9 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC23.69■■□□□ 1.38
USH1GQ495M9 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
USH1GQ495M9 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
USH1GQ495M9 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
USH1GQ495M9 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
USH1GQ495M9 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
USH1GQ495M9 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
USH1GQ495M9 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC23.68■■□□□ 1.38
USH1GQ495M9 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
USH1GQ495M9 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
USH1GQ495M9 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC23.68■■□□□ 1.38
USH1GQ495M9 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC23.68■■□□□ 1.38
USH1GQ495M9 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
USH1GQ495M9 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
USH1GQ495M9 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms