Protein–RNA interactions for Protein: Q16695

HIST3H3, Histone H3.1t, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H3Q16695 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIST3H3Q16695 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HIST3H3Q16695 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.22■□□□□ 0.51
HIST3H3Q16695 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
HIST3H3Q16695 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
HIST3H3Q16695 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HIST3H3Q16695 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIST3H3Q16695 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
HIST3H3Q16695 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
HIST3H3Q16695 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HIST3H3Q16695 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HIST3H3Q16695 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
HIST3H3Q16695 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
HIST3H3Q16695 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HIST3H3Q16695 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
HIST3H3Q16695 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.21■□□□□ 0.51
HIST3H3Q16695 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
HIST3H3Q16695 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HIST3H3Q16695 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
HIST3H3Q16695 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HIST3H3Q16695 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HIST3H3Q16695 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.21■□□□□ 0.51
HIST3H3Q16695 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
HIST3H3Q16695 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
HIST3H3Q16695 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HIST3H3Q16695 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HIST3H3Q16695 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
HIST3H3Q16695 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HIST3H3Q16695 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HIST3H3Q16695 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
HIST3H3Q16695 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.2■□□□□ 0.5
HIST3H3Q16695 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HIST3H3Q16695 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HIST3H3Q16695 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.2■□□□□ 0.5
HIST3H3Q16695 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.2■□□□□ 0.5
HIST3H3Q16695 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.2■□□□□ 0.5
HIST3H3Q16695 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.2■□□□□ 0.5
HIST3H3Q16695 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HIST3H3Q16695 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HIST3H3Q16695 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HIST3H3Q16695 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HIST3H3Q16695 AC007322.3-201ENST00000426526 701 ntBASIC18.2■□□□□ 0.5
HIST3H3Q16695 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HIST3H3Q16695 AC007322.4-201ENST00000509611 723 ntBASIC18.2■□□□□ 0.5
HIST3H3Q16695 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HIST3H3Q16695 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HIST3H3Q16695 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.2■□□□□ 0.5
HIST3H3Q16695 MFSD11-216ENST00000590393 1141 ntBASIC18.2■□□□□ 0.5
HIST3H3Q16695 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.2■□□□□ 0.5
HIST3H3Q16695 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.2■□□□□ 0.5
HIST3H3Q16695 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HIST3H3Q16695 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.19■□□□□ 0.5
HIST3H3Q16695 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
HIST3H3Q16695 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HIST3H3Q16695 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
HIST3H3Q16695 AC016769.1-201ENST00000409132 1010 ntBASIC18.19■□□□□ 0.5
HIST3H3Q16695 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
HIST3H3Q16695 AL162412.1-201ENST00000567129 965 ntBASIC18.19■□□□□ 0.5
HIST3H3Q16695 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
HIST3H3Q16695 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HIST3H3Q16695 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HIST3H3Q16695 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HIST3H3Q16695 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HIST3H3Q16695 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
HIST3H3Q16695 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HIST3H3Q16695 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.18■□□□□ 0.5
HIST3H3Q16695 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.18■□□□□ 0.5
HIST3H3Q16695 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
HIST3H3Q16695 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
HIST3H3Q16695 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HIST3H3Q16695 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HIST3H3Q16695 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HIST3H3Q16695 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HIST3H3Q16695 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HIST3H3Q16695 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
HIST3H3Q16695 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.18■□□□□ 0.5
HIST3H3Q16695 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HIST3H3Q16695 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
HIST3H3Q16695 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
HIST3H3Q16695 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.18■□□□□ 0.5
HIST3H3Q16695 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.18■□□□□ 0.5
HIST3H3Q16695 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.18■□□□□ 0.5
HIST3H3Q16695 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
HIST3H3Q16695 AC013268.1-206ENST00000638368 961 ntBASIC18.18■□□□□ 0.5
HIST3H3Q16695 AC112229.1-201ENST00000639295 961 ntBASIC18.18■□□□□ 0.5
HIST3H3Q16695 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.18■□□□□ 0.5
HIST3H3Q16695 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
HIST3H3Q16695 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.18■□□□□ 0.5
HIST3H3Q16695 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HIST3H3Q16695 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.18■□□□□ 0.5
HIST3H3Q16695 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HIST3H3Q16695 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HIST3H3Q16695 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HIST3H3Q16695 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
HIST3H3Q16695 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.18■□□□□ 0.5
HIST3H3Q16695 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
HIST3H3Q16695 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.18■□□□□ 0.5
HIST3H3Q16695 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HIST3H3Q16695 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HIST3H3Q16695 AP005212.1-201ENST00000581547 1997 ntBASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms