Protein–RNA interactions for Protein: Q12950

FOXD4, Forkhead box protein D4, humanhuman

Predicted RBP Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4Q12950 KRT18P5-201ENST00000436075 1291 ntBASIC19.42■□□□□ 0.7
FOXD4Q12950 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.42■□□□□ 0.7
FOXD4Q12950 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.42■□□□□ 0.7
FOXD4Q12950 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.42■□□□□ 0.7
FOXD4Q12950 AC092437.1-201ENST00000624794 1048 ntBASIC19.42■□□□□ 0.7
FOXD4Q12950 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.42■□□□□ 0.7
FOXD4Q12950 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.42■□□□□ 0.7
FOXD4Q12950 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXD4Q12950 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FOXD4Q12950 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FOXD4Q12950 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXD4Q12950 AC020763.4-201ENST00000623414 4170 ntBASIC19.42■□□□□ 0.7
FOXD4Q12950 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXD4Q12950 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
FOXD4Q12950 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD4Q12950 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD4Q12950 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.41■□□□□ 0.7
FOXD4Q12950 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
FOXD4Q12950 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
FOXD4Q12950 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
FOXD4Q12950 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD4Q12950 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.41■□□□□ 0.7
FOXD4Q12950 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.41■□□□□ 0.7
FOXD4Q12950 AP005435.1-201ENST00000529293 1178 ntBASIC19.41■□□□□ 0.7
FOXD4Q12950 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD4Q12950 AC011298.3-201ENST00000615796 283 ntBASIC19.41■□□□□ 0.7
FOXD4Q12950 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD4Q12950 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD4Q12950 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.41■□□□□ 0.7
FOXD4Q12950 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.41■□□□□ 0.7
FOXD4Q12950 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD4Q12950 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.41■□□□□ 0.7
FOXD4Q12950 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD4Q12950 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD4Q12950 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.41■□□□□ 0.7
FOXD4Q12950 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD4Q12950 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD4Q12950 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD4Q12950 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.41■□□□□ 0.7
FOXD4Q12950 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD4Q12950 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD4Q12950 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD4Q12950 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD4Q12950 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.4■□□□□ 0.7
FOXD4Q12950 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD4Q12950 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
FOXD4Q12950 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.4■□□□□ 0.7
FOXD4Q12950 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
FOXD4Q12950 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD4Q12950 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
FOXD4Q12950 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD4Q12950 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.4■□□□□ 0.7
FOXD4Q12950 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD4Q12950 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.4■□□□□ 0.7
FOXD4Q12950 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.4■□□□□ 0.7
FOXD4Q12950 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.4■□□□□ 0.7
FOXD4Q12950 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD4Q12950 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.4■□□□□ 0.7
FOXD4Q12950 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD4Q12950 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD4Q12950 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD4Q12950 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD4Q12950 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD4Q12950 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD4Q12950 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.4■□□□□ 0.7
FOXD4Q12950 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD4Q12950 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD4Q12950 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
FOXD4Q12950 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
FOXD4Q12950 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.7
FOXD4Q12950 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
FOXD4Q12950 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXD4Q12950 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXD4Q12950 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXD4Q12950 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.39■□□□□ 0.69
FOXD4Q12950 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXD4Q12950 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.39■□□□□ 0.69
FOXD4Q12950 AC126544.1-201ENST00000580842 1059 ntBASIC19.39■□□□□ 0.69
FOXD4Q12950 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXD4Q12950 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.39■□□□□ 0.69
FOXD4Q12950 AP006587.3-201ENST00000525742 1516 ntBASIC19.39■□□□□ 0.69
FOXD4Q12950 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
FOXD4Q12950 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FOXD4Q12950 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.39■□□□□ 0.69
FOXD4Q12950 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXD4Q12950 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FOXD4Q12950 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FOXD4Q12950 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.39■□□□□ 0.69
FOXD4Q12950 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
FOXD4Q12950 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXD4Q12950 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXD4Q12950 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
FOXD4Q12950 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.38■□□□□ 0.69
FOXD4Q12950 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
FOXD4Q12950 AC004911.1-201ENST00000416316 871 ntBASIC19.38■□□□□ 0.69
FOXD4Q12950 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FOXD4Q12950 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.38■□□□□ 0.69
FOXD4Q12950 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXD4Q12950 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FOXD4Q12950 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 231.8 ms