Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CHRNB3Q05901 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CHRNB3Q05901 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHRNB3Q05901 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHRNB3Q05901 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHRNB3Q05901 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
CHRNB3Q05901 AP005435.1-201ENST00000529293 1178 ntBASIC19.45■□□□□ 0.7
CHRNB3Q05901 AC142381.2-201ENST00000566120 298 ntBASIC19.45■□□□□ 0.7
CHRNB3Q05901 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHRNB3Q05901 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHRNB3Q05901 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.45■□□□□ 0.7
CHRNB3Q05901 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHRNB3Q05901 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHRNB3Q05901 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHRNB3Q05901 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.45■□□□□ 0.7
CHRNB3Q05901 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.45■□□□□ 0.7
CHRNB3Q05901 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CHRNB3Q05901 SYT6-210ENST00000641643 1587 ntBASIC19.44■□□□□ 0.7
CHRNB3Q05901 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNB3Q05901 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.44■□□□□ 0.7
CHRNB3Q05901 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNB3Q05901 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.44■□□□□ 0.7
CHRNB3Q05901 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNB3Q05901 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNB3Q05901 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.44■□□□□ 0.7
CHRNB3Q05901 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.44■□□□□ 0.7
CHRNB3Q05901 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.44■□□□□ 0.7
CHRNB3Q05901 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNB3Q05901 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNB3Q05901 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNB3Q05901 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.44■□□□□ 0.7
CHRNB3Q05901 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNB3Q05901 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHRNB3Q05901 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.44■□□□□ 0.7
CHRNB3Q05901 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.44■□□□□ 0.7
CHRNB3Q05901 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHRNB3Q05901 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHRNB3Q05901 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.43■□□□□ 0.7
CHRNB3Q05901 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.43■□□□□ 0.7
CHRNB3Q05901 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.43■□□□□ 0.7
CHRNB3Q05901 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHRNB3Q05901 EDA-201ENST00000338901 1233 ntBASIC19.43■□□□□ 0.7
CHRNB3Q05901 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHRNB3Q05901 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CHRNB3Q05901 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHRNB3Q05901 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.43■□□□□ 0.7
CHRNB3Q05901 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHRNB3Q05901 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CHRNB3Q05901 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.43■□□□□ 0.7
CHRNB3Q05901 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CHRNB3Q05901 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHRNB3Q05901 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHRNB3Q05901 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHRNB3Q05901 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CHRNB3Q05901 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.43■□□□□ 0.7
CHRNB3Q05901 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.42■□□□□ 0.7
CHRNB3Q05901 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.42■□□□□ 0.7
CHRNB3Q05901 AL162377.1-201ENST00000618844 1793 ntBASIC19.42■□□□□ 0.7
CHRNB3Q05901 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNB3Q05901 AC112907.3-201ENST00000577781 2400 ntBASIC19.42■□□□□ 0.7
CHRNB3Q05901 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNB3Q05901 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNB3Q05901 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNB3Q05901 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNB3Q05901 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNB3Q05901 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.42■□□□□ 0.7
CHRNB3Q05901 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.42■□□□□ 0.7
CHRNB3Q05901 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNB3Q05901 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNB3Q05901 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNB3Q05901 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNB3Q05901 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CHRNB3Q05901 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNB3Q05901 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNB3Q05901 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNB3Q05901 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNB3Q05901 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHRNB3Q05901 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CHRNB3Q05901 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNB3Q05901 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CHRNB3Q05901 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNB3Q05901 FP700111.2-201ENST00000619190 1892 ntBASIC19.41■□□□□ 0.7
CHRNB3Q05901 AL512408.1-201ENST00000569378 2000 ntBASIC19.41■□□□□ 0.7
CHRNB3Q05901 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNB3Q05901 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.41■□□□□ 0.7
CHRNB3Q05901 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.41■□□□□ 0.7
CHRNB3Q05901 AC024257.2-201ENST00000549699 147 ntBASIC19.41■□□□□ 0.7
CHRNB3Q05901 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.41■□□□□ 0.7
CHRNB3Q05901 AL355001.2-201ENST00000620617 1191 ntBASIC19.41■□□□□ 0.7
CHRNB3Q05901 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNB3Q05901 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNB3Q05901 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.41■□□□□ 0.7
CHRNB3Q05901 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNB3Q05901 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNB3Q05901 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNB3Q05901 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHRNB3Q05901 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.4■□□□□ 0.7
CHRNB3Q05901 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNB3Q05901 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHRNB3Q05901 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms