Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC15.71■□□□□ 0.11
HIST1H1AQ02539 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC15.71■□□□□ 0.11
HIST1H1AQ02539 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HIST1H1AQ02539 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
HIST1H1AQ02539 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC15.71■□□□□ 0.11
HIST1H1AQ02539 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
HIST1H1AQ02539 PALM-207ENST00000590161 2137 ntTSL 4 BASIC15.71■□□□□ 0.11
HIST1H1AQ02539 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HIST1H1AQ02539 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC15.71■□□□□ 0.1
HIST1H1AQ02539 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
HIST1H1AQ02539 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
HIST1H1AQ02539 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H1AQ02539 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H1AQ02539 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC15.7■□□□□ 0.1
HIST1H1AQ02539 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H1AQ02539 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H1AQ02539 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H1AQ02539 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H1AQ02539 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
HIST1H1AQ02539 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
HIST1H1AQ02539 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC15.7■□□□□ 0.1
HIST1H1AQ02539 NARF-205ENST00000412079 1760 ntTSL 5 BASIC15.7■□□□□ 0.1
HIST1H1AQ02539 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC15.7■□□□□ 0.1
HIST1H1AQ02539 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H1AQ02539 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
HIST1H1AQ02539 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
HIST1H1AQ02539 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC15.7■□□□□ 0.1
HIST1H1AQ02539 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H1AQ02539 AL020996.1-203ENST00000536896 2307 ntBASIC15.7■□□□□ 0.1
HIST1H1AQ02539 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC15.7■□□□□ 0.1
HIST1H1AQ02539 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H1AQ02539 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H1AQ02539 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
HIST1H1AQ02539 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC15.7■□□□□ 0.1
HIST1H1AQ02539 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC15.7■□□□□ 0.1
HIST1H1AQ02539 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H1AQ02539 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H1AQ02539 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H1AQ02539 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H1AQ02539 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
HIST1H1AQ02539 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC15.7■□□□□ 0.1
HIST1H1AQ02539 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H1AQ02539 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC15.7■□□□□ 0.1
HIST1H1AQ02539 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC15.7■□□□□ 0.1
HIST1H1AQ02539 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
HIST1H1AQ02539 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H1AQ02539 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H1AQ02539 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC15.7■□□□□ 0.1
HIST1H1AQ02539 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
HIST1H1AQ02539 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H1AQ02539 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
HIST1H1AQ02539 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC15.69■□□□□ 0.1
HIST1H1AQ02539 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HIST1H1AQ02539 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIST1H1AQ02539 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HIST1H1AQ02539 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HIST1H1AQ02539 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC15.69■□□□□ 0.1
HIST1H1AQ02539 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
HIST1H1AQ02539 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIST1H1AQ02539 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
HIST1H1AQ02539 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
HIST1H1AQ02539 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIST1H1AQ02539 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
HIST1H1AQ02539 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HIST1H1AQ02539 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HIST1H1AQ02539 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC15.69■□□□□ 0.1
HIST1H1AQ02539 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIST1H1AQ02539 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIST1H1AQ02539 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
HIST1H1AQ02539 AC055733.4-201ENST00000638462 1354 ntBASIC15.69■□□□□ 0.1
HIST1H1AQ02539 STX5-203ENST00000394690 1568 ntTSL 5 BASIC15.69■□□□□ 0.1
HIST1H1AQ02539 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIST1H1AQ02539 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIST1H1AQ02539 MPST-204ENST00000404393 1329 ntTSL 5 BASIC15.68■□□□□ 0.1
HIST1H1AQ02539 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
HIST1H1AQ02539 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC15.68■□□□□ 0.1
HIST1H1AQ02539 ADM-207ENST00000530439 1839 ntTSL 2 BASIC15.68■□□□□ 0.1
HIST1H1AQ02539 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HIST1H1AQ02539 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HIST1H1AQ02539 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC15.68■□□□□ 0.1
HIST1H1AQ02539 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC15.68■□□□□ 0.1
HIST1H1AQ02539 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HIST1H1AQ02539 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC15.68■□□□□ 0.1
HIST1H1AQ02539 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HIST1H1AQ02539 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HIST1H1AQ02539 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HIST1H1AQ02539 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC15.68■□□□□ 0.1
HIST1H1AQ02539 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC15.68■□□□□ 0.1
HIST1H1AQ02539 AL139246.5-201ENST00000606645 996 ntBASIC15.68■□□□□ 0.1
HIST1H1AQ02539 AL136967.2-201ENST00000623968 743 ntBASIC15.68■□□□□ 0.1
HIST1H1AQ02539 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HIST1H1AQ02539 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HIST1H1AQ02539 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HIST1H1AQ02539 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HIST1H1AQ02539 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HIST1H1AQ02539 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HIST1H1AQ02539 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC15.68■□□□□ 0.1
HIST1H1AQ02539 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HIST1H1AQ02539 FEM1AP1-201ENST00000431297 1995 ntBASIC15.67■□□□□ 0.1
HIST1H1AQ02539 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms