Protein–RNA interactions for Protein: P68366

TUBA4A, Tubulin alpha-4A chain, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4AP68366 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TUBA4AP68366 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TUBA4AP68366 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TUBA4AP68366 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TUBA4AP68366 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
TUBA4AP68366 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.29■□□□□ 0.68
TUBA4AP68366 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.29■□□□□ 0.68
TUBA4AP68366 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TUBA4AP68366 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.29■□□□□ 0.68
TUBA4AP68366 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
TUBA4AP68366 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
TUBA4AP68366 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TUBA4AP68366 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
TUBA4AP68366 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
TUBA4AP68366 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TUBA4AP68366 SUDS3P1-201ENST00000505831 966 ntBASIC19.28■□□□□ 0.68
TUBA4AP68366 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.28■□□□□ 0.68
TUBA4AP68366 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TUBA4AP68366 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TUBA4AP68366 AL162377.1-201ENST00000618844 1793 ntBASIC19.28■□□□□ 0.68
TUBA4AP68366 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
TUBA4AP68366 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.28■□□□□ 0.68
TUBA4AP68366 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TUBA4AP68366 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
TUBA4AP68366 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.28■□□□□ 0.68
TUBA4AP68366 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TUBA4AP68366 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.28■□□□□ 0.68
TUBA4AP68366 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
TUBA4AP68366 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
TUBA4AP68366 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TUBA4AP68366 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TUBA4AP68366 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TUBA4AP68366 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TUBA4AP68366 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.27■□□□□ 0.68
TUBA4AP68366 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.27■□□□□ 0.68
TUBA4AP68366 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TUBA4AP68366 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TUBA4AP68366 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.27■□□□□ 0.68
TUBA4AP68366 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TUBA4AP68366 MIR939-201ENST00000401314 82 ntBASIC19.27■□□□□ 0.68
TUBA4AP68366 AC099791.1-201ENST00000416440 715 ntBASIC19.27■□□□□ 0.68
TUBA4AP68366 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TUBA4AP68366 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TUBA4AP68366 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TUBA4AP68366 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TUBA4AP68366 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
TUBA4AP68366 TNXA-203ENST00000507684 2038 ntBASIC19.27■□□□□ 0.67
TUBA4AP68366 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TUBA4AP68366 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TUBA4AP68366 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TUBA4AP68366 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TUBA4AP68366 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.26■□□□□ 0.67
TUBA4AP68366 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBA4AP68366 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TUBA4AP68366 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TUBA4AP68366 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBA4AP68366 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
TUBA4AP68366 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBA4AP68366 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.26■□□□□ 0.67
TUBA4AP68366 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBA4AP68366 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBA4AP68366 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBA4AP68366 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.26■□□□□ 0.67
TUBA4AP68366 AL136967.2-201ENST00000623968 743 ntBASIC19.26■□□□□ 0.67
TUBA4AP68366 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBA4AP68366 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBA4AP68366 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.26■□□□□ 0.67
TUBA4AP68366 PLK5-205ENST00000642079 1969 ntBASIC19.26■□□□□ 0.67
TUBA4AP68366 AC116562.4-201ENST00000641316 2276 ntBASIC19.26■□□□□ 0.67
TUBA4AP68366 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBA4AP68366 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
TUBA4AP68366 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBA4AP68366 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TUBA4AP68366 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TUBA4AP68366 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.25■□□□□ 0.67
TUBA4AP68366 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
TUBA4AP68366 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TUBA4AP68366 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.25■□□□□ 0.67
TUBA4AP68366 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.25■□□□□ 0.67
TUBA4AP68366 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TUBA4AP68366 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TUBA4AP68366 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TUBA4AP68366 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TUBA4AP68366 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TUBA4AP68366 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TUBA4AP68366 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TUBA4AP68366 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.25■□□□□ 0.67
TUBA4AP68366 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TUBA4AP68366 BX842568.3-201ENST00000418104 571 ntBASIC19.25■□□□□ 0.67
TUBA4AP68366 AC233992.3-201ENST00000607491 485 ntBASIC19.25■□□□□ 0.67
TUBA4AP68366 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
TUBA4AP68366 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TUBA4AP68366 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.25■□□□□ 0.67
TUBA4AP68366 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TUBA4AP68366 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
TUBA4AP68366 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TUBA4AP68366 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TUBA4AP68366 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
TUBA4AP68366 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TUBA4AP68366 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms