Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SEC61A1P61619 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SEC61A1P61619 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
SEC61A1P61619 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
SEC61A1P61619 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SEC61A1P61619 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
SEC61A1P61619 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SEC61A1P61619 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
SEC61A1P61619 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SEC61A1P61619 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.96■□□□□ 0.47
SEC61A1P61619 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.96■□□□□ 0.47
SEC61A1P61619 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.96■□□□□ 0.47
SEC61A1P61619 KRT18P61-201ENST00000585825 1298 ntBASIC17.96■□□□□ 0.47
SEC61A1P61619 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
SEC61A1P61619 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
SEC61A1P61619 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SEC61A1P61619 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SEC61A1P61619 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SEC61A1P61619 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SEC61A1P61619 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
SEC61A1P61619 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.96■□□□□ 0.47
SEC61A1P61619 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.96■□□□□ 0.46
SEC61A1P61619 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.46
SEC61A1P61619 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SEC61A1P61619 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.96■□□□□ 0.46
SEC61A1P61619 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.95■□□□□ 0.46
SEC61A1P61619 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.95■□□□□ 0.46
SEC61A1P61619 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SEC61A1P61619 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.95■□□□□ 0.46
SEC61A1P61619 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SEC61A1P61619 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.95■□□□□ 0.46
SEC61A1P61619 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SEC61A1P61619 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SEC61A1P61619 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SEC61A1P61619 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
SEC61A1P61619 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
SEC61A1P61619 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SEC61A1P61619 AL020996.1-203ENST00000536896 2307 ntBASIC17.95■□□□□ 0.46
SEC61A1P61619 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SEC61A1P61619 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
SEC61A1P61619 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.95■□□□□ 0.46
SEC61A1P61619 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
SEC61A1P61619 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SEC61A1P61619 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SEC61A1P61619 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SEC61A1P61619 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.95■□□□□ 0.46
SEC61A1P61619 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SEC61A1P61619 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SEC61A1P61619 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SEC61A1P61619 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SEC61A1P61619 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SEC61A1P61619 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SEC61A1P61619 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.94■□□□□ 0.46
SEC61A1P61619 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.94■□□□□ 0.46
SEC61A1P61619 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.94■□□□□ 0.46
SEC61A1P61619 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.94■□□□□ 0.46
SEC61A1P61619 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.94■□□□□ 0.46
SEC61A1P61619 OR7E47P-201ENST00000546390 1422 ntBASIC17.94■□□□□ 0.46
SEC61A1P61619 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.94■□□□□ 0.46
SEC61A1P61619 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SEC61A1P61619 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SEC61A1P61619 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SEC61A1P61619 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.94■□□□□ 0.46
SEC61A1P61619 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SEC61A1P61619 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SEC61A1P61619 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.93■□□□□ 0.46
SEC61A1P61619 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SEC61A1P61619 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SEC61A1P61619 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.93■□□□□ 0.46
SEC61A1P61619 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SEC61A1P61619 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
SEC61A1P61619 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SEC61A1P61619 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.93■□□□□ 0.46
SEC61A1P61619 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SEC61A1P61619 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.93■□□□□ 0.46
SEC61A1P61619 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.93■□□□□ 0.46
SEC61A1P61619 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.93■□□□□ 0.46
SEC61A1P61619 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SEC61A1P61619 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SEC61A1P61619 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SEC61A1P61619 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SEC61A1P61619 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SEC61A1P61619 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SEC61A1P61619 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SEC61A1P61619 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SEC61A1P61619 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SEC61A1P61619 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SEC61A1P61619 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SEC61A1P61619 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SEC61A1P61619 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
SEC61A1P61619 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SEC61A1P61619 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SEC61A1P61619 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SEC61A1P61619 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.92■□□□□ 0.46
SEC61A1P61619 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
SEC61A1P61619 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SEC61A1P61619 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SEC61A1P61619 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SEC61A1P61619 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SEC61A1P61619 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 1930.5 ms