Protein–RNA interactions for Protein: P56750

CLDN17, Claudin-17, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN17P56750 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN17P56750 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN17P56750 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
CLDN17P56750 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN17P56750 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN17P56750 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN17P56750 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN17P56750 AC091799.1-201ENST00000422823 811 ntBASIC18.39■□□□□ 0.53
CLDN17P56750 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.39■□□□□ 0.53
CLDN17P56750 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.39■□□□□ 0.53
CLDN17P56750 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN17P56750 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN17P56750 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.39■□□□□ 0.53
CLDN17P56750 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN17P56750 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.39■□□□□ 0.53
CLDN17P56750 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN17P56750 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN17P56750 AC011484.1-201ENST00000377652 1995 ntBASIC18.39■□□□□ 0.53
CLDN17P56750 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN17P56750 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.39■□□□□ 0.53
CLDN17P56750 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN17P56750 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN17P56750 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN17P56750 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN17P56750 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN17P56750 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN17P56750 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN17P56750 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN17P56750 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN17P56750 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN17P56750 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN17P56750 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
CLDN17P56750 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN17P56750 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
CLDN17P56750 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN17P56750 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN17P56750 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN17P56750 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN17P56750 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN17P56750 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDN17P56750 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CLDN17P56750 AC006128.1-201ENST00000624704 1661 ntBASIC18.38■□□□□ 0.53
CLDN17P56750 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.38■□□□□ 0.53
CLDN17P56750 AC116050.2-201ENST00000612102 1779 ntBASIC18.37■□□□□ 0.53
CLDN17P56750 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
CLDN17P56750 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN17P56750 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN17P56750 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CLDN17P56750 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.37■□□□□ 0.53
CLDN17P56750 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN17P56750 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CLDN17P56750 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN17P56750 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.37■□□□□ 0.53
CLDN17P56750 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.37■□□□□ 0.53
CLDN17P56750 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.37■□□□□ 0.53
CLDN17P56750 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.37■□□□□ 0.53
CLDN17P56750 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.37■□□□□ 0.53
CLDN17P56750 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CLDN17P56750 AC092437.1-201ENST00000624794 1048 ntBASIC18.37■□□□□ 0.53
CLDN17P56750 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.37■□□□□ 0.53
CLDN17P56750 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.37■□□□□ 0.53
CLDN17P56750 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.37■□□□□ 0.53
CLDN17P56750 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN17P56750 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN17P56750 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CLDN17P56750 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN17P56750 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.37■□□□□ 0.53
CLDN17P56750 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
CLDN17P56750 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.37■□□□□ 0.53
CLDN17P56750 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.37■□□□□ 0.53
CLDN17P56750 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN17P56750 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN17P56750 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN17P56750 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN17P56750 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN17P56750 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN17P56750 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN17P56750 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN17P56750 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN17P56750 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN17P56750 AC004911.1-201ENST00000416316 871 ntBASIC18.36■□□□□ 0.53
CLDN17P56750 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.36■□□□□ 0.53
CLDN17P56750 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.36■□□□□ 0.53
CLDN17P56750 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN17P56750 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN17P56750 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.36■□□□□ 0.53
CLDN17P56750 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.36■□□□□ 0.53
CLDN17P56750 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.36■□□□□ 0.53
CLDN17P56750 AL137784.2-201ENST00000607332 1000 ntBASIC18.36■□□□□ 0.53
CLDN17P56750 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CLDN17P56750 AC013268.1-206ENST00000638368 961 ntBASIC18.36■□□□□ 0.53
CLDN17P56750 AC112229.1-201ENST00000639295 961 ntBASIC18.36■□□□□ 0.53
CLDN17P56750 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CLDN17P56750 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.36■□□□□ 0.53
CLDN17P56750 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN17P56750 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN17P56750 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN17P56750 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN17P56750 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
CLDN17P56750 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms