Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
AP1S2P56377 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
AP1S2P56377 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.07■□□□□ 0.8
AP1S2P56377 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
AP1S2P56377 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.07■□□□□ 0.8
AP1S2P56377 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
AP1S2P56377 AL162430.1-201ENST00000480705 870 ntBASIC20.07■□□□□ 0.8
AP1S2P56377 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
AP1S2P56377 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
AP1S2P56377 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
AP1S2P56377 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.07■□□□□ 0.8
AP1S2P56377 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
AP1S2P56377 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
AP1S2P56377 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
AP1S2P56377 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.06■□□□□ 0.8
AP1S2P56377 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
AP1S2P56377 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
AP1S2P56377 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
AP1S2P56377 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.06■□□□□ 0.8
AP1S2P56377 AC016769.1-201ENST00000409132 1010 ntBASIC20.06■□□□□ 0.8
AP1S2P56377 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
AP1S2P56377 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.06■□□□□ 0.8
AP1S2P56377 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
AP1S2P56377 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.06■□□□□ 0.8
AP1S2P56377 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.06■□□□□ 0.8
AP1S2P56377 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.06■□□□□ 0.8
AP1S2P56377 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
AP1S2P56377 AC010536.3-201ENST00000620306 533 ntBASIC20.06■□□□□ 0.8
AP1S2P56377 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.06■□□□□ 0.8
AP1S2P56377 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
AP1S2P56377 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.06■□□□□ 0.8
AP1S2P56377 AC007225.1-201ENST00000566331 1836 ntBASIC20.06■□□□□ 0.8
AP1S2P56377 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
AP1S2P56377 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
AP1S2P56377 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
AP1S2P56377 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP1S2P56377 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.05■□□□□ 0.8
AP1S2P56377 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.05■□□□□ 0.8
AP1S2P56377 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP1S2P56377 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
AP1S2P56377 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.05■□□□□ 0.8
AP1S2P56377 AC007322.3-201ENST00000426526 701 ntBASIC20.05■□□□□ 0.8
AP1S2P56377 TERF1P5-201ENST00000477545 1207 ntBASIC20.05■□□□□ 0.8
AP1S2P56377 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
AP1S2P56377 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
AP1S2P56377 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP1S2P56377 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP1S2P56377 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
AP1S2P56377 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP1S2P56377 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.05■□□□□ 0.8
AP1S2P56377 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.04■□□□□ 0.8
AP1S2P56377 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.04■□□□□ 0.8
AP1S2P56377 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
AP1S2P56377 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.04■□□□□ 0.8
AP1S2P56377 AC027702.1-201ENST00000563810 1770 ntBASIC20.04■□□□□ 0.8
AP1S2P56377 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
AP1S2P56377 CDV3P1-201ENST00000471403 739 ntBASIC20.04■□□□□ 0.8
AP1S2P56377 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.04■□□□□ 0.8
AP1S2P56377 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
AP1S2P56377 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP1S2P56377 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
AP1S2P56377 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP1S2P56377 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.04■□□□□ 0.8
AP1S2P56377 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP1S2P56377 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP1S2P56377 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP1S2P56377 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
AP1S2P56377 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
AP1S2P56377 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP1S2P56377 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
AP1S2P56377 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
AP1S2P56377 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.03■□□□□ 0.8
AP1S2P56377 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.03■□□□□ 0.8
AP1S2P56377 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.03■□□□□ 0.8
AP1S2P56377 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
AP1S2P56377 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP1S2P56377 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP1S2P56377 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.03■□□□□ 0.8
AP1S2P56377 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP1S2P56377 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
AP1S2P56377 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP1S2P56377 AC006015.1-201ENST00000429970 570 ntBASIC20.03■□□□□ 0.8
AP1S2P56377 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
AP1S2P56377 AC013268.1-206ENST00000638368 961 ntBASIC20.03■□□□□ 0.8
AP1S2P56377 AC112229.1-201ENST00000639295 961 ntBASIC20.03■□□□□ 0.8
AP1S2P56377 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
AP1S2P56377 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP1S2P56377 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
AP1S2P56377 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP1S2P56377 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.03■□□□□ 0.8
AP1S2P56377 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.02■□□□□ 0.8
AP1S2P56377 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP1S2P56377 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP1S2P56377 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
AP1S2P56377 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
AP1S2P56377 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP1S2P56377 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
AP1S2P56377 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
AP1S2P56377 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP1S2P56377 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms