Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NUBP1P53384 NUDT16P1-203ENST00000513809 620 ntBASIC20.7■□□□□ 0.9
NUBP1P53384 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.7■□□□□ 0.9
NUBP1P53384 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.7■□□□□ 0.9
NUBP1P53384 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.7■□□□□ 0.9
NUBP1P53384 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
NUBP1P53384 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NUBP1P53384 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NUBP1P53384 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
NUBP1P53384 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUBP1P53384 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUBP1P53384 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NUBP1P53384 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUBP1P53384 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUBP1P53384 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUBP1P53384 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUBP1P53384 AC104076.2-201ENST00000448912 469 ntBASIC20.69■□□□□ 0.9
NUBP1P53384 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.69■□□□□ 0.9
NUBP1P53384 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.69■□□□□ 0.9
NUBP1P53384 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.69■□□□□ 0.9
NUBP1P53384 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.69■□□□□ 0.9
NUBP1P53384 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
NUBP1P53384 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUBP1P53384 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.69■□□□□ 0.9
NUBP1P53384 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUBP1P53384 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NUBP1P53384 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
NUBP1P53384 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.69■□□□□ 0.9
NUBP1P53384 AC087633.2-202ENST00000565166 1439 ntBASIC20.69■□□□□ 0.9
NUBP1P53384 AC079598.2-202ENST00000546624 1451 ntBASIC20.69■□□□□ 0.9
NUBP1P53384 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.68■□□□□ 0.9
NUBP1P53384 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NUBP1P53384 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NUBP1P53384 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NUBP1P53384 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.68■□□□□ 0.9
NUBP1P53384 UPK3BP1-201ENST00000428678 509 ntBASIC20.68■□□□□ 0.9
NUBP1P53384 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.68■□□□□ 0.9
NUBP1P53384 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.68■□□□□ 0.9
NUBP1P53384 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.68■□□□□ 0.9
NUBP1P53384 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.68■□□□□ 0.9
NUBP1P53384 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NUBP1P53384 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
NUBP1P53384 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
NUBP1P53384 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NUBP1P53384 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
NUBP1P53384 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
NUBP1P53384 FAM197Y1-201ENST00000421178 764 ntBASIC20.67■□□□□ 0.9
NUBP1P53384 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.67■□□□□ 0.9
NUBP1P53384 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.67■□□□□ 0.9
NUBP1P53384 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.67■□□□□ 0.9
NUBP1P53384 LINC01238-205ENST00000567549 1107 ntBASIC20.67■□□□□ 0.9
NUBP1P53384 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.67■□□□□ 0.9
NUBP1P53384 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NUBP1P53384 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
NUBP1P53384 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NUBP1P53384 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NUBP1P53384 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.66■□□□□ 0.9
NUBP1P53384 FITM1-202ENST00000559294 800 ntBASIC20.66■□□□□ 0.9
NUBP1P53384 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.66■□□□□ 0.9
NUBP1P53384 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NUBP1P53384 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NUBP1P53384 KRT8P9-201ENST00000558927 1449 ntBASIC20.66■□□□□ 0.9
NUBP1P53384 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NUBP1P53384 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NUBP1P53384 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NUBP1P53384 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NUBP1P53384 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NUBP1P53384 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NUBP1P53384 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NUBP1P53384 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.65■□□□□ 0.9
NUBP1P53384 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NUBP1P53384 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NUBP1P53384 MIR1238-201ENST00000408483 83 ntBASIC20.65■□□□□ 0.9
NUBP1P53384 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.65■□□□□ 0.9
NUBP1P53384 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.65■□□□□ 0.9
NUBP1P53384 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC20.65■□□□□ 0.9
NUBP1P53384 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.65■□□□□ 0.9
NUBP1P53384 AP000525.1-201ENST00000608286 694 ntBASIC20.65■□□□□ 0.9
NUBP1P53384 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NUBP1P53384 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NUBP1P53384 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NUBP1P53384 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NUBP1P53384 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.64■□□□□ 0.89
NUBP1P53384 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NUBP1P53384 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.64■□□□□ 0.89
NUBP1P53384 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.64■□□□□ 0.89
NUBP1P53384 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.64■□□□□ 0.89
NUBP1P53384 AL121829.2-201ENST00000620908 328 ntBASIC20.64■□□□□ 0.89
NUBP1P53384 AC006557.6-201ENST00000623071 864 ntBASIC20.64■□□□□ 0.89
NUBP1P53384 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.64■□□□□ 0.89
NUBP1P53384 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NUBP1P53384 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NUBP1P53384 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NUBP1P53384 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NUBP1P53384 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
NUBP1P53384 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NUBP1P53384 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NUBP1P53384 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.63■□□□□ 0.89
NUBP1P53384 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NUBP1P53384 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms